Atomistry » Zinc » PDB 4d9w-4dr4 » 4dnm
Atomistry »
  Zinc »
    PDB 4d9w-4dr4 »
      4dnm »

Zinc in PDB 4dnm: Crystal Structure of An Amidohydrolase (COG3618) From Burkholderia Multivorans (Target Efi-500235) with Bound Hepes, Space Group P3221

Protein crystallography data

The structure of Crystal Structure of An Amidohydrolase (COG3618) From Burkholderia Multivorans (Target Efi-500235) with Bound Hepes, Space Group P3221, PDB code: 4dnm was solved by M.W.Vetting, R.Toro, R.Bhosle, R.D.Seidel, B.Hillerich, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, N.F.Al Obaidi, W.D.Zencheck, H.J.Imker, J.A.Gerlt, F.M.Raushel, S.C.Almo, Enzymefunction Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.99 / 2.15
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 75.070, 75.070, 142.260, 90.00, 90.00, 120.00
R / Rfree (%) 19 / 22.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of An Amidohydrolase (COG3618) From Burkholderia Multivorans (Target Efi-500235) with Bound Hepes, Space Group P3221 (pdb code 4dnm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of An Amidohydrolase (COG3618) From Burkholderia Multivorans (Target Efi-500235) with Bound Hepes, Space Group P3221, PDB code: 4dnm:

Zinc binding site 1 out of 1 in 4dnm

Go back to Zinc Binding Sites List in 4dnm
Zinc binding site 1 out of 1 in the Crystal Structure of An Amidohydrolase (COG3618) From Burkholderia Multivorans (Target Efi-500235) with Bound Hepes, Space Group P3221


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of An Amidohydrolase (COG3618) From Burkholderia Multivorans (Target Efi-500235) with Bound Hepes, Space Group P3221 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn404

b:32.4
occ:1.00
OD1 A:ASP72 2.0 26.6 1.0
OD2 A:ASP72 2.3 26.7 1.0
SG A:CYS71 2.4 45.0 1.0
CG A:ASP72 2.4 29.1 1.0
O A:CYS71 3.3 34.6 1.0
CB A:CYS71 3.3 33.2 1.0
C A:CYS71 3.4 34.9 1.0
CA A:CYS71 3.8 32.1 1.0
CB A:ASP72 3.9 37.4 1.0
N A:ASP72 4.1 35.4 1.0
O A:HOH593 4.2 43.0 1.0
CA A:ASP72 4.4 39.5 1.0

Reference:

M.W.Vetting, R.Toro, R.Bhosle, R.D.Seidel, B.Hillerich, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, N.F.Al Obaidi, W.D.Zencheck, H.J.Imker, J.A.Gerlt, F.M.Raushel, S.C.Almo, Enzyme Function Initiative (Efi). Crystal Structure of An Amidohydrolase (COG3618) From Burkholderia Multivorans (Target Efi-500235) with Bound Hepes, Space Group P3221 To Be Published.
Page generated: Sat Oct 26 21:32:20 2024

Last articles

Mg in 6TXC
Mg in 6U0H
Mg in 6U01
Mg in 6U07
Mg in 6U05
Mg in 6U03
Mg in 6TZZ
Mg in 6TXE
Mg in 6TZU
Mg in 6TZM
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy