Atomistry » Zinc » PDB 4cj0-4csz » 4cqd
Atomistry »
  Zinc »
    PDB 4cj0-4csz »
      4cqd »

Zinc in PDB 4cqd: The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies

Enzymatic activity of The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies

All present enzymatic activity of The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies:
3.5.99.4;

Protein crystallography data

The structure of The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies, PDB code: 4cqd was solved by S.Balotra, J.Newman, N.G.French, T.S.Peat, C.Scott, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.57 / 2.25
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 106.346, 87.063, 113.859, 90.00, 104.58, 90.00
R / Rfree (%) 16.626 / 19.434

Other elements in 4cqd:

The structure of The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies (pdb code 4cqd). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies, PDB code: 4cqd:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4cqd

Go back to Zinc Binding Sites List in 4cqd
Zinc binding site 1 out of 2 in the The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1404

b:25.7
occ:1.00
 NE2 A:HIS60 2.1 20.7 1.0
NE2 A:HIS62 2.1 18.8 1.0
O A:HOH2009 2.2 28.0 1.0
NE2 A:HIS217 2.2 24.0 1.0
OD1 A:ASP303 2.5 21.9 1.0
CE1 A:HIS62 3.0 17.9 1.0
CE1 A:HIS60 3.0 22.1 1.0
CD2 A:HIS60 3.1 21.3 1.0
CD2 A:HIS217 3.1 22.9 1.0
CD2 A:HIS62 3.2 17.5 1.0
CE1 A:HIS217 3.2 22.8 1.0
CG A:ASP303 3.5 23.1 1.0
O7 A:MLI1407 3.6 27.7 1.0
OD2 A:ASP303 3.7 23.9 1.0
C2 A:MLI1407 3.9 28.5 1.0
ND1 A:HIS60 4.2 20.8 1.0
ND1 A:HIS62 4.2 17.3 1.0
CG A:HIS60 4.2 19.5 1.0
CG A:HIS217 4.2 22.9 1.0
ND1 A:HIS217 4.2 24.3 1.0
CG A:HIS62 4.3 17.6 1.0
O6 A:MLI1407 4.4 25.7 1.0
O9 A:MLI1407 4.4 34.7 1.0
OD1 A:ASN304 4.4 20.7 1.0
C1 A:MLI1407 4.5 26.9 1.0
C3 A:MLI1407 4.6 30.8 1.0
NE2 A:HIS219 4.8 32.0 0.5
CB A:ASP303 4.8 19.7 1.0
CE1 A:HIS219 4.9 30.8 0.5

Zinc binding site 2 out of 2 in 4cqd

Go back to Zinc Binding Sites List in 4cqd
Zinc binding site 2 out of 2 in the The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn1404

b:26.6
occ:1.00
 O B:HOH2013 2.1 25.1 1.0
NE2 B:HIS60 2.1 17.7 1.0
NE2 B:HIS62 2.1 16.6 1.0
NE2 B:HIS217 2.2 22.5 1.0
OD1 B:ASP303 2.5 23.1 1.0
CE1 B:HIS62 3.0 16.8 1.0
CE1 B:HIS60 3.1 18.8 1.0
CD2 B:HIS60 3.1 19.2 1.0
CD2 B:HIS217 3.1 23.7 1.0
CD2 B:HIS62 3.2 16.9 1.0
CE1 B:HIS217 3.2 22.4 1.0
CG B:ASP303 3.5 21.7 1.0
O9 B:MLI1407 3.6 26.0 1.0
OD2 B:ASP303 3.7 20.3 1.0
C3 B:MLI1407 4.0 27.0 1.0
ND1 B:HIS62 4.2 16.8 1.0
ND1 B:HIS60 4.2 20.3 1.0
CG B:HIS60 4.2 18.0 1.0
ND1 B:HIS217 4.2 24.3 1.0
CG B:HIS217 4.2 22.9 1.0
CG B:HIS62 4.3 17.3 1.0
C1 B:MLI1407 4.4 27.2 1.0
OD1 B:ASN304 4.4 18.0 1.0
O7 B:MLI1407 4.4 34.1 1.0
O8 B:MLI1407 4.5 22.0 1.0
C2 B:MLI1407 4.7 30.2 1.0
NE2 B:HIS219 4.7 30.8 0.5
CB B:ASP303 4.9 19.3 1.0
CE1 B:HIS219 5.0 30.0 0.5

Reference:

S.Balotra, J.Newman, N.G.French, T.S.Peat, C.Scott. The Reaction Mechanism of the N-Isopropylammelide Isopropylaminohydrolase Atzc: Insights From Structural and Mutagenesis Studies To Be Published.
Page generated: Wed Aug 20 16:51:53 2025

Last articles

Zn in 4KYH
Zn in 4KXQ
Zn in 4KXD
Zn in 4KXB
Zn in 4KXC
Zn in 4KXA
Zn in 4KW9
Zn in 4KVP
Zn in 4KX9
Zn in 4KX8
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy