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Zinc in PDB 3l00: Crystal Structure of Benzylated Snap-Tag

Enzymatic activity of Crystal Structure of Benzylated Snap-Tag

All present enzymatic activity of Crystal Structure of Benzylated Snap-Tag:
2.1.1.63;

Protein crystallography data

The structure of Crystal Structure of Benzylated Snap-Tag, PDB code: 3l00 was solved by S.Schmitt, F.Pojer, M.Schiltz, K.Johnsson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.35 / 1.70
Space group P 43 2 2
Cell size a, b, c (Å), α, β, γ (°) 77.770, 77.770, 64.880, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 20.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Benzylated Snap-Tag (pdb code 3l00). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Benzylated Snap-Tag, PDB code: 3l00:

Zinc binding site 1 out of 1 in 3l00

Go back to Zinc Binding Sites List in 3l00
Zinc binding site 1 out of 1 in the Crystal Structure of Benzylated Snap-Tag


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Benzylated Snap-Tag within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn180

b:16.0
occ:1.00
ND1 A:HIS85 2.1 21.7 1.0
NE2 A:HIS29 2.1 19.1 1.0
SG A:CYS24 2.3 26.2 1.0
SG A:CYS5 2.3 27.8 1.0
CE1 A:HIS29 2.9 19.5 1.0
CE1 A:HIS85 3.0 21.2 1.0
CG A:HIS85 3.1 18.9 1.0
CD2 A:HIS29 3.2 19.7 1.0
CB A:CYS5 3.2 33.2 1.0
CB A:CYS24 3.3 28.4 1.0
CB A:HIS85 3.5 18.1 1.0
O A:HIS85 3.8 16.5 1.0
ND1 A:HIS29 4.1 19.9 1.0
NE2 A:HIS85 4.1 22.4 1.0
CD2 A:HIS85 4.2 20.2 1.0
CG A:HIS29 4.3 19.8 1.0
C A:HIS85 4.4 16.4 1.0
O A:HOH321 4.5 24.5 1.0
CA A:CYS24 4.5 28.4 1.0
N A:CYS24 4.6 28.4 1.0
CA A:CYS5 4.6 34.2 1.0
CA A:HIS85 4.6 17.3 1.0
O A:GLY27 4.7 20.6 1.0
NE2 A:GLN90 4.7 19.2 1.0
CB A:GLN26 4.8 25.7 1.0
SD A:MET7 4.8 37.9 1.0

Reference:

S.Schmitt, B.Mollwitz, F.Pojer, M.Bannwarth, M.Schiltz, K.Johnsson. Snap-Tag Structure To Be Published.
Page generated: Sat Oct 26 08:18:53 2024

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