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Zinc in PDB 2jne: uc(Nmr) Structure of E.Coli Yfgj Modelled with Two Zn+2 Bound. Northeast Structural Genomics Consortium Target ER317.

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Structure of E.Coli Yfgj Modelled with Two Zn+2 Bound. Northeast Structural Genomics Consortium Target ER317. (pdb code 2jne). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the uc(Nmr) Structure of E.Coli Yfgj Modelled with Two Zn+2 Bound. Northeast Structural Genomics Consortium Target ER317., PDB code: 2jne:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2jne

Go back to Zinc Binding Sites List in 2jne
Zinc binding site 1 out of 2 in the uc(Nmr) Structure of E.Coli Yfgj Modelled with Two Zn+2 Bound. Northeast Structural Genomics Consortium Target ER317.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure of E.Coli Yfgj Modelled with Two Zn+2 Bound. Northeast Structural Genomics Consortium Target ER317. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn150

b:0.0
occ:1.00
SG A:CYS8 2.2 0.0 1.0
SG A:CYS5 2.2 0.0 1.0
SG A:CYS24 2.2 0.0 1.0
SG A:CYS21 2.4 0.0 1.0
O A:CYS8 2.6 0.0 1.0
HB3 A:CYS21 2.9 0.0 1.0
CB A:CYS24 3.3 0.0 1.0
CB A:CYS21 3.3 0.0 1.0
CB A:CYS5 3.3 0.0 1.0
HB3 A:CYS24 3.3 0.0 1.0
HB2 A:CYS24 3.4 0.0 1.0
HB3 A:CYS5 3.4 0.0 1.0
CB A:CYS8 3.4 0.0 1.0
HB2 A:CYS8 3.5 0.0 1.0
HB2 A:CYS5 3.5 0.0 1.0
HB2 A:HIS10 3.6 0.0 1.0
C A:CYS8 3.6 0.0 1.0
H A:HIS10 3.9 0.0 1.0
HD23 A:LEU12 3.9 0.0 1.0
HB2 A:CYS21 4.0 0.0 1.0
HB3 A:GLU26 4.0 0.0 1.0
CA A:CYS8 4.1 0.0 1.0
HD22 A:LEU12 4.1 0.0 1.0
HA A:CYS21 4.2 0.0 1.0
HB3 A:CYS8 4.3 0.0 1.0
H A:CYS8 4.4 0.0 1.0
N A:HIS10 4.4 0.0 1.0
CA A:CYS21 4.4 0.0 1.0
CB A:HIS10 4.5 0.0 1.0
CD2 A:LEU12 4.5 0.0 1.0
H A:CYS5 4.5 0.0 1.0
HB3 A:HIS10 4.7 0.0 1.0
N A:CYS8 4.7 0.0 1.0
CA A:CYS24 4.7 0.0 1.0
CA A:CYS5 4.7 0.0 1.0
N A:GLN9 4.7 0.0 1.0
O A:HIS10 4.8 0.0 1.0
CA A:HIS10 4.8 0.0 1.0
HB2 A:GLU26 4.9 0.0 1.0
C A:HIS10 4.9 0.0 1.0
O A:VAL11 4.9 0.0 1.0
CB A:GLU26 4.9 0.0 1.0
HD13 A:ILE28 5.0 0.0 1.0
HA A:GLN9 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2jne

Go back to Zinc Binding Sites List in 2jne
Zinc binding site 2 out of 2 in the uc(Nmr) Structure of E.Coli Yfgj Modelled with Two Zn+2 Bound. Northeast Structural Genomics Consortium Target ER317.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of uc(Nmr) Structure of E.Coli Yfgj Modelled with Two Zn+2 Bound. Northeast Structural Genomics Consortium Target ER317. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn200

b:0.0
occ:1.00
OD1 A:ASP36 1.9 0.0 1.0
ND1 A:HIS58 2.0 0.0 1.0
SG A:CYS37 2.2 0.0 1.0
SG A:CYS34 2.2 0.0 1.0
SG A:CYS54 2.4 0.0 1.0
CE1 A:HIS58 2.8 0.0 1.0
CG A:ASP36 3.0 0.0 1.0
HE1 A:HIS58 3.0 0.0 1.0
HB2 A:HIS58 3.1 0.0 1.0
CG A:HIS58 3.1 0.0 1.0
HB3 A:CYS34 3.3 0.0 1.0
CB A:CYS34 3.4 0.0 1.0
OD2 A:ASP36 3.4 0.0 1.0
CB A:HIS58 3.6 0.0 1.0
CB A:CYS37 3.7 0.0 1.0
HB2 A:CYS37 3.7 0.0 1.0
HB2 A:CYS34 3.8 0.0 1.0
HB2 A:CYS54 3.8 0.0 1.0
CB A:CYS54 3.8 0.0 1.0
HB3 A:HIS58 3.9 0.0 1.0
NE2 A:HIS58 4.0 0.0 1.0
CD2 A:HIS58 4.1 0.0 1.0
N A:CYS37 4.1 0.0 1.0
H A:ASP36 4.2 0.0 1.0
H A:CYS37 4.2 0.0 1.0
CB A:ASP36 4.3 0.0 1.0
C A:ASP36 4.3 0.0 1.0
HB2 A:HIS56 4.3 0.0 1.0
HB3 A:HIS56 4.4 0.0 1.0
HB3 A:CYS54 4.4 0.0 1.0
HB3 A:CYS37 4.4 0.0 1.0
CA A:CYS37 4.5 0.0 1.0
HB2 A:ASP36 4.6 0.0 1.0
CA A:ASP36 4.7 0.0 1.0
O A:ASP36 4.7 0.0 1.0
CA A:CYS34 4.7 0.0 1.0
N A:ASP36 4.8 0.0 1.0
HA A:CYS37 4.8 0.0 1.0
HE2 A:HIS58 4.8 0.0 1.0
CB A:HIS56 4.9 0.0 1.0
CA A:HIS58 4.9 0.0 1.0
C A:CYS34 5.0 0.0 1.0
HA A:CYS54 5.0 0.0 1.0
CA A:CYS54 5.0 0.0 1.0

Reference:

T.A.Ramelot, J.R.Cort, A.A.Yee, C.H.Arrowsmith, M.A.Kennedy. uc(Nmr) Structure of E.Coli Yfgj Bound to Two Zn+2. To Be Published.
Page generated: Thu Oct 17 01:18:16 2024

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