Atomistry » Zinc » PDB 2g3f-2gda » 2gag
Atomistry »
  Zinc »
    PDB 2g3f-2gda »
      2gag »

Zinc in PDB 2gag: Heteroteterameric Sarcosine: Structure of A Diflavin Metaloenzyme at 1.85 A Resolution

Protein crystallography data

The structure of Heteroteterameric Sarcosine: Structure of A Diflavin Metaloenzyme at 1.85 A Resolution, PDB code: 2gag was solved by Z.W.Chen, A.Hassan-Abdulah, G.Zhao, M.S.Jorns, F.S.Mathews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 73.186, 132.407, 197.418, 90.00, 90.00, 90.00
R / Rfree (%) 18.9 / 23

Zinc Binding Sites:

The binding sites of Zinc atom in the Heteroteterameric Sarcosine: Structure of A Diflavin Metaloenzyme at 1.85 A Resolution (pdb code 2gag). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Heteroteterameric Sarcosine: Structure of A Diflavin Metaloenzyme at 1.85 A Resolution, PDB code: 2gag:

Zinc binding site 1 out of 1 in 2gag

Go back to Zinc Binding Sites List in 2gag
Zinc binding site 1 out of 1 in the Heteroteterameric Sarcosine: Structure of A Diflavin Metaloenzyme at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Heteroteterameric Sarcosine: Structure of A Diflavin Metaloenzyme at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn101

b:21.4
occ:1.00
ND1 D:HIS59 2.1 16.3 1.0
SG D:CYS9 2.3 18.8 1.0
SG D:CYS63 2.4 22.6 1.0
SG D:CYS6 2.4 20.9 1.0
CE1 D:HIS59 3.1 19.2 1.0
CG D:HIS59 3.1 21.2 1.0
CB D:CYS9 3.2 17.2 1.0
CB D:CYS63 3.3 17.2 1.0
CB D:CYS6 3.4 17.3 1.0
CB D:HIS59 3.5 21.6 1.0
N D:CYS63 3.5 20.7 1.0
N D:CYS9 3.6 19.7 1.0
CA D:CYS63 4.0 23.4 1.0
CA D:CYS9 4.1 22.9 1.0
NE2 D:HIS59 4.2 20.7 1.0
CB D:ASN8 4.2 18.7 1.0
CD2 D:HIS59 4.3 19.1 1.0
C D:ASN8 4.5 21.9 1.0
C D:GLY62 4.6 21.9 1.0
OD1 D:ASN8 4.7 28.7 1.0
CA D:ASN8 4.7 17.1 1.0
O C:HOH1029 4.8 22.3 1.0
N D:ASN8 4.8 22.0 1.0
CA D:GLY62 4.8 19.0 1.0
CA D:CYS6 4.8 19.0 1.0
C D:CYS63 4.9 20.8 1.0
CG D:ASN8 4.9 27.5 1.0
CA D:HIS59 5.0 21.1 1.0

Reference:

Z.W.Chen, A.Hassan-Abdulah, G.Zhao, M.S.Jorns, F.S.Mathews. Heterotetrameric Sarcosine Oxidase: Structure of A Diflavin Metalloenzyme at 1.85 A Resolution. J.Mol.Biol. V. 360 1000 2006.
ISSN: ISSN 0022-2836
PubMed: 16820168
DOI: 10.1016/J.JMB.2006.05.067
Page generated: Thu Oct 17 00:07:59 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy