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Zinc in PDB, part 525 (files: 20961-21000), PDB 8ph1-8psz

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 20961-21000 (PDB 8ph1-8psz).
  1. 8ph1 (Zn: 2) - Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3708
  2. 8ph2 (Zn: 2) - Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3746
  3. 8ph3 (Zn: 2) - Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 3747
  4. 8ph9 (Zn: 2) - E. Coli Rna Polymerase Paused at Ops Site (Non-Complementary Scaffold)
    Other atoms: Mg (1);
  5. 8phk (Zn: 2) - Fully Recruited Rfah Bound to E. Coli Transcription Complex Paused at Ops Site
    Other atoms: Mg (1);
  6. 8phl (Zn: 1) - Human Carbonic Anhydrase II Containing 4-Fluorophenylalanine
    Other atoms: Hg (1); F (12);
  7. 8phz (Zn: 5) - Helical Reconstruction of Chikv NSP3 Helical Scaffolds
  8. 8pi5 (Zn: 4) - Crystal Structure of Human Insulin DESB30 Precursor with An Alanine- Methionine-Lysine C-Peptide in Hexamer (T3R3) Conformation
    Other atoms: Cl (1);
  9. 8pib (Zn: 1) - Autoinhibited Rfah Bound to E. Coli Transcription Complex Paused at Ops Site (Encounter Complex)
    Other atoms: Mg (1);
  10. 8pid (Zn: 2) - Backtracked E. Coli Transcription Complex Paused at Ops Site and Bound to Rfah
    Other atoms: Mg (1);
  11. 8pil (Zn: 2) - E. Coli Transcription Complex Paused at Ops Site and Bound to Rfah and Nusa
    Other atoms: Mg (1);
  12. 8pim (Zn: 2) - Fully Recruited Rfah Bound to E. Coli Transcription Complex Paused at Ops Site (Not Complementary Scaffold)
    Other atoms: Mg (1);
  13. 8pjn (Zn: 2) - Catalytic Module of Human Ctlh E3 Ligase Bound to Multiphosphorylated UBE2H~Ubiquitin
  14. 8pk7 (Zn: 1) - Helical Reconstruction of Chikv NSP3 Helical Scaffolds
  15. 8pkb (Zn: 1) - Staphylococcus Aureus Endonuclease IV with Bound Phosphate
    Other atoms: Fe (2); Cl (2);
  16. 8pki (Zn: 1) - Cryo-Em Structure of NR5A2-Nucleosome Complex Shl+5.5
  17. 8pkp (Zn: 1) - Cryo-Em Structure of the Apo Anaphase-Promoting Complex/Cyclosome (Apc/C) at 3.2 Angstrom Resolution
  18. 8pmq (Zn: 2) - Catalytic Module of Yeast Gid E3 Ligase Bound to Multiphosphorylated UBC8~Ubiquitin
  19. 8pn3 (Zn: 3) - Crystal Structure of the HC7-GLU200ALA Mutant Complexed to A Tetraglycopeptide.
  20. 8pn5 (Zn: 8) - Crystal Structure of the HC7-GLU200ALA Mutant Complexed to A Triglycopeptide
  21. 8poa (Zn: 2) - Structure of Enterovirus A71 2A Protease
  22. 8pp6 (Zn: 1) - Human Rybp-PRC1 Bound to H2AK118UB1 Nucleosome
  23. 8pp7 (Zn: 8) - Human Rybp-PRC1 Bound to Mononucleosome
  24. 8ppk (Zn: 3) - Bat-Hp-Cov NSP1 and EIF1 Bound to the Human 40S Small Ribosomal Subunit
    Other atoms: Mg (111);
  25. 8ppt (Zn: 3) - Pyrococcus Abyssi Dna Polymerase D (Pold) in Its Editing Mode Bound to A Primer/Template Substrate Containing A Mismatch
    Other atoms: Mg (3);
  26. 8ppu (Zn: 3) - Pyrococcus Abyssi Dna Polymerase D (Pold) in Its Editing Mode Bound to A Primer/Template Substrate Containing Three Consecutive Mismatches
    Other atoms: Mg (3);
  27. 8ppv (Zn: 3) - Intermediate Conformer of Pyrococcus Abyssi Dna Polymerase D (Pold) Bound to A Primer/Template Substrate Containing Three Consecutive Mismatches
    Other atoms: Mg (3);
  28. 8pql (Zn: 3) - K48-Linked Ubiquitin Chain Formation with A Cullin-Ring E3 Ligase and CDC34: NEDD8-CUL2-RBX1-Elob/C-FEM1C with Trapped UBE2R2-Donor Ub- Acceptor Ub-SIL1 Peptide
  29. 8pr4 (Zn: 3) - Dynactin Pointed End Bound to JIP3
  30. 8prb (Zn: 2) - The Structure of V13BAGEL6
  31. 8prc (Zn: 3) - The Structure of V13BAGEL8
  32. 8pre (Zn: 2) - The Structure of NVBAGEL2 in the Presence of Zn(II)
  33. 8prf (Zn: 2) - The Structure of NVBAGEL5
  34. 8psn (Zn: 3) - Tilapia Lake Virus Polymerase in Vrna Initiation State (Transcriptase Conformation)
    Other atoms: Mg (2);
  35. 8pso (Zn: 1) - Tilapia Lake Virus Polymerase in Vrna Initiation State (Core Only)
    Other atoms: Mg (2);
  36. 8psq (Zn: 1) - Tilapia Lake Virus Polymerase in Crna Pre-Initiation State Mode A (Core Only)
    Other atoms: Mg (1);
  37. 8pss (Zn: 1) - Tilapia Lake Virus Polymerase in Crna Pre-Initiation State Mode B (Core-Endo Only)
    Other atoms: Mg (1);
  38. 8psu (Zn: 1) - Tilapia Lake Virus Polymerase in Vrna Pre-Initiation State Mode A (Core Only)
  39. 8psx (Zn: 3) - Tilapia Lake Virus Polymerase in Vrna Elongation State (Transcriptase Conformation)
    Other atoms: Mg (2);
  40. 8psz (Zn: 3) - Tilapia Lake Virus Polymerase in Vrna Elongation State with Additional Mode B Promoter (Transcriptase Conformation)
    Other atoms: Mg (2);
Page generated: Tue Feb 25 12:10:56 2025

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