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Zinc in PDB, part 453 (files: 18081-18120), PDB 7kef-7ktp

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 18081-18120 (PDB 7kef-7ktp).
  1. 7kef (Zn: 8) - Rna Polymerase II Elongation Complex with Unnatural Base DTPT3, Rnam in Swing State
    Other atoms: Mg (1);
  2. 7kfn (Zn: 2) - Structure of Human Adenosine Deaminase Acting on Dsrna (ADAR2) Bound to Dsrna Containing A 2'-Deoxy Benner'S Base Z Opposite the Edited Base
  3. 7khb (Zn: 2) - Escherichia Coli Rna Polymerase and RRNBP1 Promoter Open Complex
    Other atoms: Mg (1);
  4. 7khc (Zn: 2) - Escherichia Coli Rna Polymerase and RRNBP1 Promoter Closed Complex
    Other atoms: Mg (1);
  5. 7khe (Zn: 3) - Escherichia Coli Rna Polymerase and RRNBP1 Promoter Pre-Open Complex with Dksa/Ppgpp
    Other atoms: Mg (1);
  6. 7khi (Zn: 3) - Escherichia Coli Rna Polymerase and RRNBP1 Promoter Complex with Dksa/Ppgpp
    Other atoms: Mg (1);
  7. 7khm (Zn: 4) - Crystal Structure of HDHHS20 Bound to Palmitoyl Coa
  8. 7khq (Zn: 2) - Crystal Structure of Oxa-48 K73A in Complex with Meropenem
    Other atoms: Cl (4);
  9. 7khy (Zn: 2) - Crystal Structure of Oxa-163 K73A in Complex with Meropenem
    Other atoms: Cl (2);
  10. 7khz (Zn: 1) - Crystal Structure of Oxa-163 K73A in Complex with Imipenem
    Other atoms: Cl (1);
  11. 7kif (Zn: 2) - Mycobacterium Tuberculosis Wt Rnap Transcription Open Promoter Complex with WHIB7 Transcription Factor
    Other atoms: Mg (1); Fe (4);
  12. 7kil (Zn: 8) - Crystal Structure of the Mouse Lipin-1 M-Lip Domain with Zinc
    Other atoms: Cl (11);
  13. 7kim (Zn: 2) - Mycobacterium Tuberculosis Wt Rnap Transcription Closed Promoter Complex with WHIB7 Transcription Factor
    Other atoms: Mg (1); Fe (4);
  14. 7kin (Zn: 2) - Mycobacterium Tuberculosis Wt Rnap Transcription Open Promoter Complex with WHIB7 Promoter
    Other atoms: Mg (1);
  15. 7kjy (Zn: 8) - Symmetry in Yeast Alcohol Dehydrogenase 1 - Open Form with Nadh
  16. 7kkm (Zn: 4) - Structure of the Catalytic Domain of Tankyrase 1
  17. 7kkn (Zn: 4) - Structure of the Catalytic Domain of Tankyrase 1 in Complex with Talazoparib
    Other atoms: F (8);
  18. 7kko (Zn: 3) - Structure of the Catalytic Domain of Tankyrase 1 in Complex with Olaparib
    Other atoms: F (3);
  19. 7kkp (Zn: 2) - Structure of the Catalytic Domain of Tankyrase 1 in Complex with Niraparib
  20. 7kkq (Zn: 4) - Structure of the Catalytic Domain of Tankyrase 1 in Complex with Veliparib
  21. 7klo (Zn: 40) - Solution Structure of the PHD1 Domain of Histone Demethylase KDM5A
  22. 7klr (Zn: 40) - Solution Structure of the PHD1 Domain of Histone Demethylase KDM5A in Complex with A Histone H3(1-10) Peptide
  23. 7kmm (Zn: 13) - Crystal Structure of XAC1771, A Novel Carbohydrate Acetylesterase From Xanthomonas Citri
  24. 7knd (Zn: 2) - C1B Domain of Protein Kinase C in Apo Form
  25. 7knf (Zn: 4) - 1.80A Resolution Structure of Independent Phosphoglycerate Mutase From C. Elegans in Complex with A Macrocyclic Peptide Inhibitor (Ce-1 Nhoh)
    Other atoms: Na (4);
  26. 7kng (Zn: 4) - 2.10A Resolution Structure of Independent Phosphoglycerate Mutase From C. Elegans in Complex with A Macrocyclic Peptide Inhibitor (Ce-2 Y7F)
    Other atoms: Cl (4); Na (4);
  27. 7knj (Zn: 2) - C1B Domain of Protein Kinase C in Complex with Phorbol Ester and Phosphatidylcholine
  28. 7ko6 (Zn: 2) - C1B Domain of Protein Kinase C in Complex with Ingenol-3-Angelate and Phosphocholine
  29. 7koa (Zn: 2) - Room Temperature Structure of Sars-Cov-2 NSP10/16 Methyltransferase in A Complex with Cap-0 and Sam Determined By Pink-Beam Serial Crystallography
  30. 7koj (Zn: 5) - The Crystal Structure of Papain-Like Protease of Sars Cov-2, C111S Mutant, in Complex with PLP_SNYDER494
    Other atoms: Cl (3);
  31. 7kok (Zn: 5) - The Crystal Structure of Papain-Like Protease of Sars Cov-2, C111S Mutant, in Complex with PLP_SNYDER496
    Other atoms: Cl (3);
  32. 7kol (Zn: 4) - The Crystal Structure of Papain-Like Protease of Sars Cov-2 in Complex with PLP_SNYDER496
    Other atoms: Cl (4);
  33. 7kr9 (Zn: 1) - Bifunctional Enzyme Glmu Bound to Zn(II)
    Other atoms: Ca (2);
  34. 7krn (Zn: 5) - Structure of Sars-Cov-2 Backtracked Complex Bound to NSP13 Helicase - NSP13(1)-Btc
    Other atoms: Mg (2); Al (1); F (3);
  35. 7kro (Zn: 8) - Structure of Sars-Cov-2 Backtracked Complex Complex Bound to NSP13 Helicase - NSP13(2)-Btc
    Other atoms: Al (2); F (6); Mg (3);
  36. 7krp (Zn: 2) - Structure of Sars-Cov-2 Backtracked Complex Complex Bound to NSP13 Helicase - Btc (Local Refinement)
    Other atoms: Mg (1);
  37. 7krx (Zn: 4) - The Crystal Structure of Papain-Like Protease of Sars Cov-2, C111S Mutant, in Complex with PLP_SNYDER441
    Other atoms: Cl (2);
  38. 7kso (Zn: 8) - Cryo-Em Structure of PRC2:EZH1-AEBP2-JARID2
  39. 7ksr (Zn: 7) - PRC2:EZH1_A From A Dimeric PRC2 Bound to A Nucleosome
  40. 7ktp (Zn: 7) - PRC2:EZH1_B From A Dimeric PRC2 Bound to A Nucleosome
Page generated: Tue Feb 25 12:08:02 2025

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