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Zinc in PDB, part 340 (files: 13561-13600), PDB 5y1t-5yht

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 13561-13600 (PDB 5y1t-5yht).
  1. 5y1t (Zn: 1) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-2-(3-(2,3-Dimethylbenzyl)Ureido)-N-Hydroxy-4- Methylpentanamide
    Other atoms: Mg (3);
  2. 5y1v (Zn: 1) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-2-(3-(2,6-Diethylphenyl)Ureido)- N-Hydroxy-4- Methylpentanamide
    Other atoms: Mg (2);
  3. 5y1w (Zn: 1) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N with Magnesium Bound to Active Site Zinc
    Other atoms: Mg (3);
  4. 5y1x (Zn: 1) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with Actinonin
    Other atoms: Mg (1);
  5. 5y1z (Zn: 6) - Crystal Structure of ZMYND8 Phd-Bromo-Pwwp Tandem in Complex with Drebrin Adf-H Domain
  6. 5y20 (Zn: 2) - Crystal Structure of AL1 Phd Finger Bound to H3K4ME3
  7. 5y2f (Zn: 1) - Human SIRT6 in Complex with Allosteric Activator Mdl-801
    Other atoms: F (1); Br (1); Cl (2);
  8. 5y2r (Zn: 1) - 2.5 Atm CO2-Pressurized Human Carbonic Anhydrase II
  9. 5y2s (Zn: 1) - 7.0 Atm CO2-Pressurized Human Carbonic Anhydrase II
  10. 5y3e (Zn: 1) - Crystal Structure of Sars Coronavirus Papain-Like Protease in Complex with Glycerol
    Other atoms: Na (5);
  11. 5y3i (Zn: 1) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-N-Hydroxy-4-Methyl-2-(3-(3-Methylbenzyl)Ureido)Pentanamide
    Other atoms: Mg (3);
  12. 5y3q (Zn: 1) - Crystal Structure of Sars Coronavirus Papain-Like Protease Conjugated with Beta-Mercaptoethanol
    Other atoms: Na (5);
  13. 5y46 (Zn: 2) - Crystal Structure of A Collagen-Like Peptide with Interruption Sequence
  14. 5y4h (Zn: 1) - Human SIRT3 in Complex with Halistanol Sulfate
  15. 5y4k (Zn: 1) - Crystal Structure of Dddy Mutant Y260A
  16. 5y5b (Zn: 2) - Crystal Structure of Imp-1 Metallo-Beta-Lactamase
  17. 5y5n (Zn: 1) - Crystal Structure of Human Sirtuin 2 in Complex with A Selective Inhibitor
  18. 5y6d (Zn: 9) - Vim-2 Metallo-Beta-Lactamase in Complex with (R)-2-(4-Fluorophenyl)-2- ((S)-3-Mercapto-2-Methylpropanamido)Acetic Acid (Compound 11)
    Other atoms: F (4);
  19. 5y6e (Zn: 6) - Vim-2 Metallo-Beta-Lactamase in Complex with (R)-2-(4-Hydroxyphenyl)- 2-((S)-3-Mercapto-2-Methylpropanamido)Acetic Acid (Compound 12)
  20. 5y88 (Zn: 6) - Cryo-Em Structure of the Intron-Lariat Spliceosome Ready For Disassembly From S.Cerevisiae at 3.5 Angstrom
    Other atoms: Mg (6);
  21. 5yat (Zn: 4) - Crystal Structure of Mitochondrial Alcohol Dehydrogenase Isozyme III From Komagataella Phaffii GS115
  22. 5ybf (Zn: 10) - Crystal Structure of the GLUA2O Lbd in Complex with Glutamate and HBT1
    Other atoms: F (18);
  23. 5ybg (Zn: 10) - Crystal Structure of the GLUA2O Lbd in Complex with Glutamate and LY451395
  24. 5yc3 (Zn: 2) - Crystal Structure of AL3 Phd Finger Bound to H3K4ME2
  25. 5yc4 (Zn: 2) - Crystal Structure of AL3 Phd Finger Bound to H3K4ME3
  26. 5yd0 (Zn: 4) - Crystal Structure of Schlafen 13 (SLFN13) N'-Domain
  27. 5yd7 (Zn: 6) - Crystal Structure of Vim-2 Metallo-Beta-Lactamase
  28. 5ydr (Zn: 1) - Structure of DNMT1 Rfts Domain in Complex with Ubiquitin
  29. 5ye4 (Zn: 26) - Crystal Structure of the Complex of Di-Acetylated Histone H4 and 1A9D7 Fab Fragment
  30. 5yec (Zn: 2) - Crystal Structure of ATG7CTD-ATG8-Mgatp Complex in Form II
    Other atoms: Mg (2);
  31. 5yef (Zn: 24) - Crystal Structure of Ctcf ZFS2-8-HS5-1AE
  32. 5yeg (Zn: 10) - Crystal Structure of Ctcf ZFS4-8-HS5-1A Complex
  33. 5yeh (Zn: 10) - Crystal Structure of Ctcf ZFS4-8-Ecbs
  34. 5yel (Zn: 12) - Crystal Structure of Ctcf ZFS6-11-GB7CSE
  35. 5yf4 (Zn: 2) - A Kinase Complex MST4-MOB4
  36. 5yfb (Zn: 2) - Crystal Structure of A New Dpp III Family Member
  37. 5yfi (Zn: 6) - Crystal Structure of the Anti-Human Prostaglandin E Receptor EP4 Antibody Fab Fragment
  38. 5yhg (Zn: 1) - The Crystal Structure of Staphylococcus Aureus Cnta in Complex with Staphylopine and Zinc
    Other atoms: Cl (1);
  39. 5yho (Zn: 2) - Crystal Structure of Acetolactate Decarboxylase From Enterobacter Cloacae
    Other atoms: Cl (2);
  40. 5yht (Zn: 4) - Crystal Structure of A Phosphatase From Mycobacterium Tuberculosis in Complex with Its Substrate
Page generated: Tue Feb 25 12:02:59 2025

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