Zinc in PDB, part 300 (files: 11961-12000),
PDB 5nxw-5o9d
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 11961-12000 (PDB 5nxw-5o9d).
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5nxw (Zn: 1) - Carbonic Anhydrase II Inhibitor RA9
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5ny1 (Zn: 1) - Carbonic Anhydrase II Inhibitor RA10
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5ny3 (Zn: 1) - Carbonic Anhydrase II Inhibitor RA11
Other atoms:
Cl (1);
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5ny6 (Zn: 1) - Carbonic Anhydrase II Inhibitor RA12
Other atoms:
Cl (3);
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5nya (Zn: 1) - Carbonic Anhydrase II Inhibitor RA13
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5o07 (Zn: 1) - The Crystal Structure of the Human Carbonic Anhydrase II in Complex with A Nitroimidazole Sulfamate Inhibitor
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5o1a (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Compound MB240
Other atoms:
I (4);
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5o1b (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Compound MB84
Other atoms:
I (4);
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5o1c (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Compound MB184
Other atoms:
F (2);
I (2);
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5o1d (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Compound MB481
Other atoms:
I (2);
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5o1e (Zn: 2) - P53 Cancer Mutant Y220C Im Complex with Compound MB577
Other atoms:
I (2);
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5o1f (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Compound MB582
Other atoms:
I (2);
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5o1g (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Compound MB487
Other atoms:
I (2);
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5o1h (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Compound MB539
Other atoms:
I (2);
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5o1i (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Compound MB710
Other atoms:
I (1);
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5o1j (Zn: 4) - Lytic Transglycosylase in Action
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5o2e (Zn: 4) - Crystal Structure of Ndm-1 in Complex with Hydrolyzed Cefuroxime - New Refinement
Other atoms:
Cl (2);
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5o2f (Zn: 4) - Crystal Structure of Ndm-1 in Complex with Hydrolyzed Ampicillin - New Refinement
Other atoms:
Cl (1);
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5o31 (Zn: 1) - Mitochondrial Complex I in the Deactive State
Other atoms:
Fe (28);
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5o3y (Zn: 4) - SOD1 Bound to Ebsulfur
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5o40 (Zn: 4) - SOD1 Bound to Ebselen
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5o4f (Zn: 6) - Structure of GLUK3 Ligand-Binding Domain (S1S2) in Complex with the Agonist Lm-12B at 2.10 A Resolution
Other atoms:
Cl (5);
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5o5j (Zn: 2) - Structure of the 30S Small Ribosomal Subunit From Mycobacterium Smegmatis
Other atoms:
Mg (217);
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5o5r (Zn: 2) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1023
Other atoms:
F (1);
Ca (1);
Cl (1);
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5o5t (Zn: 2) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1007
Other atoms:
F (1);
Ca (1);
Cl (1);
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5o5u (Zn: 2) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Urea Based Inhibitor Psma 1027
Other atoms:
F (1);
Ca (1);
Cl (1);
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5o60 (Zn: 4) - Structure of the 50S Large Ribosomal Subunit From Mycobacterium Smegmatis
Other atoms:
Mg (408);
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5o6c (Zn: 6) - Crystal Structure of A Threonine-Selective Rcr E3 Ligase
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5o6t (Zn: 4) - BIRC4 Ring in Complex with Dimeric Ubiquitin Variant
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5o6y (Zn: 4) - Crystal Structure of the BC1960 Peptidoglycan N-Acetylglucosamine Deacetylase in Complex with 4-Naphthalen-1-Yl-~{N}-Oxidanyl-Benzamide
Other atoms:
Cl (4);
Na (21);
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5o76 (Zn: 4) - Structure of PHOSPHOY371 C-Cbl in Complex with ZAP70-Peptide and Ubv.Pcbl Ubiquitin Variant
Other atoms:
Ca (2);
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5o7e (Zn: 1) - Crystal Structure of the Peptidase Domain of Collagenase H From Clostridium Histolyticum in Complex with N-Aryl Mercaptoacetamide- Based Inhibitor
Other atoms:
Ca (1);
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5o7n (Zn: 8) - Beta-Lactamase Vim-2 in Complex with (2R)-1-(2-Benzyl-3- Mercaptopropanoyl)Piperidine-2-Carboxylic Acid
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5o85 (Zn: 4) - P34-P44 Complex
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5o8h (Zn: 8) - Crystal Structure of R. Ruber Adh-A, Mutant Y294F, W295A, F43H, H39Y
Other atoms:
K (2);
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5o8n (Zn: 1) - Structure of Thermolysin at Room Temperature Via A Method of Acoustically Induced Rotation.
Other atoms:
Ca (4);
Cl (3);
Na (5);
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5o8q (Zn: 16) - Crystal Structure of R. Ruber Adh-A, Mutant Y294F, W295A
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5o94 (Zn: 1) - X-Ray Structure of A Zinc Binding GB1 Mutant
Other atoms:
Na (1);
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5o9b (Zn: 20) - Solution uc(Nmr) Structure of Human GATA2 C-Terminal Zinc Finger Domain
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5o9d (Zn: 8) - Crystal Structure of R. Ruber Adh-A, Mutant Y294F, W295A, Y54F, F43H, H39Y
Page generated: Mon Dec 15 11:35:39 2025
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