Zinc in PDB, part 273 (files: 10881-10920),
PDB 5f8j-5fi9
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 10881-10920 (PDB 5f8j-5fi9).
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5f8j (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C1S4 Form)
Other atoms:
Mg (2);
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5f8l (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C3S1 Form)
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5f8m (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C3S4/5 Form)
Other atoms:
Mg (2);
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5f8n (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C3S6 Form)
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5f98 (Zn: 6) - Crystal Structure of Rig-I in Complex with Cap-0 Rna
Other atoms:
Mg (6);
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5f9f (Zn: 6) - Crystal Structure of Rig-I Helicase-Rd in Complex with 24-Mer Blunt- End Hairpin Rna
Other atoms:
F (12);
Mg (6);
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5f9h (Zn: 6) - Crystal Structure of Rig-I Helicase-Rd in Complex with 24-Mer 5' Triphosphate Hairpin Rna
Other atoms:
Mg (8);
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5f9y (Zn: 2) - Crystal Structure of Prolyl-Trna Synthetase From Cryptosporidium Parvum Complexed with L-Proline and Amp
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5f9z (Zn: 2) - Crystal Structure of Prolyl-Trna Synthetase From Cryptosporidium Parvum Complexed with Halofuginone and Amppnp
Other atoms:
Cl (2);
Br (2);
Mg (2);
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5fb0 (Zn: 4) - Crystal Structure of A Phd Finger Bound to Histone H3 T3PH Peptide
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5fb1 (Zn: 2) - Crystal Structure of A Phd Finger Bound to Histone H3 K9ME3 Peptide
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5fb3 (Zn: 6) - Structure of Glycerophosphate Dehydrogenase in Complex with Nadph
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5fb9 (Zn: 6) - S1 Nuclease From Aspergillus Oryzae with Unoccupied Active Site
Other atoms:
Na (2);
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5fba (Zn: 3) - S1 Nuclease From Aspergillus Oryzae in Complex with Phosphate
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5fbb (Zn: 6) - S1 Nuclease From Aspergillus Oryzae in Complex with Phosphate and Adenosine 5'-Monophosphate
Other atoms:
Ca (5);
Na (3);
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5fbc (Zn: 3) - S1 Nuclease From Aspergillus Oryzae in Complex with 2'-Deoxyadenosine- 5'-Thio-Monophosphate (5'Damp(S)).
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5fbd (Zn: 3) - S1 Nuclease From Aspergillus Oryzae in Complex with Phosphate and 2'- Deoxycytidine
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5fbf (Zn: 3) - S1 Nuclease From Aspergillus Oryzae in Complex with Two Molecules of 2'-Deoxycytidine-5'-Monophosphate
Other atoms:
Na (1);
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5fbg (Zn: 6) - S1 Nuclease From Aspergillus Oryzae, Mutant D65N, in Complex with Phosphate, 2'-Deoxycytidine and 2'-Deoxyguanosine.
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5fbj (Zn: 1) - Complex Structure of JMJD5 and Substrate
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5fc1 (Zn: 2) - Murine SMPDL3A in Complex with Sulfate
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5fc5 (Zn: 2) - Murine SMPDL3A in Complex with Phosphocholine
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5fc6 (Zn: 2) - Murine SMPDL3A in Complex with Adp Analog Ampcp
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5fc7 (Zn: 2) - Murine SMPDL3A in Complex with Sulfate (Tetragonal)
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5fca (Zn: 8) - Murine SMPDL3A in Presence of Excess Zinc
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5fcb (Zn: 2) - Murine SMPDL3A in Complex with Amp
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5fch (Zn: 4) - Crystal Structure of Xaa-Pro Dipeptidase From Xanthomonas Campestris, Phosphate and Zn Bound
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5fcw (Zn: 2) - HDAC8 Complexed with A Hydroxamic Acid
Other atoms:
K (2);
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5fd3 (Zn: 12) - Structure of LIN54 Tesmin Domain Bound to Dna
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5fd6 (Zn: 8) - Zinc-Bound Manganese Uptake Regulator
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5fdc (Zn: 1) - Crystal Structure of Human Carbonic Anhydrase II in Complex with the Anticonvulsant Sulfamide Jnj-26990990 and Its S,S-Dioxide Analog.
Other atoms:
Hg (1);
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5fdi (Zn: 1) - Crystal Structure of Human Carbonic Anhydrase II with the Anticonvulsant Sulfamide Jnj-26990990 and Its S,S-Dioxide Analog.
Other atoms:
Hg (1);
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5fer (Zn: 4) - Complex of TRIM25 Ring with UBCH5-Ub
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5fey (Zn: 4) - TRIM32 Ring
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5fgn (Zn: 1) - Integral Membrane Protein Lipooligosaccharide Phosphoethanolamine Transferase A (Epta) From Neisseria Meningitidis
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5fgs (Zn: 9) - Crystal Structure of C-Terminal Domain of Shaft Pilin Spaa From Lactobacillus Rhamnosus Gg - P21212 Space Group
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5fgw (Zn: 27) - Structure of SDA1 Nuclease with Bound Zinc Ion
Other atoms:
Cl (5);
Na (2);
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5fi3 (Zn: 4) - Heteroyohimbine Synthase THAS1 From Catharanthus Roseus - Complex with Nadp+
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5fi5 (Zn: 4) - Heteroyohimbine Synthase THAS1 From Catharanthus Roseus - Apo Form
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5fi9 (Zn: 4) - Closed Form of Murine Acid Sphingomyelinase in Complex with Bisphosphonate Inhibitor Abpa
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