Zinc in PDB, part 273 (files: 10881-10920),
PDB 5f41-5fc6
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 10881-10920 (PDB 5f41-5fc6).
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5f41 (Zn: 2) - Dengue Serotype 3 Rna-Dependent Rna Polymerase Bound to Fd-83-KI26
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5f59 (Zn: 1) - The Crystal Structure of MLL3 Set Domain
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5f5a (Zn: 1) - Crystal Structure of Human JMJD2D Complexed with KDOAM16
Other atoms:
Ni (1);
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5f5c (Zn: 1) - Crystal Structure of Human JMJD2D Complexed with KDOPP7
Other atoms:
Ni (1);
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5f5e (Zn: 1) - The Crystal Structure of MLL1 Set Domain with N3816I/Q3867L Mutation
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5f5i (Zn: 2) - Crystal Structure of Human JMJD2A Complexed with KDOOA011340
Other atoms:
Ni (2);
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5f6c (Zn: 1) - The Structure of E. Coli Rnase E Catalytically Inactive Mutant with Rna Bound
Other atoms:
Mg (2);
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5f6k (Zn: 2) - Crystal Structure of the MLL3-ASH2L-RBBP5 Complex
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5f6l (Zn: 1) - The Crystal Structure of MLL1 (N3861I/Q3867L) in Complex with RBBP5 and ASH2L
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5f6q (Zn: 3) - Crystal Structure of Metallothiol Transferase From Bacillus Anthracis Str. Ames
Other atoms:
K (1);
Cl (4);
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5f7p (Zn: 2) - Rok Repressor LMO0178 From Listeria Monocytogenes
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5f7q (Zn: 4) - Rok Repressor LMO0178 From Listeria Monocytogenes Bound to Operator
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5f7r (Zn: 2) - Rok Repressor LMO0178 From Listeria Monocytogenes Bound to Inducer
Other atoms:
Cl (1);
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5f7t (Zn: 8) - TRIM5 B-BOX2 and Coiled-Coil Chimera
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5f8g (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C1S1 Form)
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5f8h (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C1S1/2 Form)
Other atoms:
Mg (1);
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5f8i (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C1S2/3 Form)
Other atoms:
Mg (2);
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5f8j (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C1S4 Form)
Other atoms:
Mg (2);
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5f8l (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C3S1 Form)
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5f8m (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C3S4/5 Form)
Other atoms:
Mg (2);
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5f8n (Zn: 1) - Enterovirus 71 Polymerase Elongation Complex (C3S6 Form)
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5f98 (Zn: 6) - Crystal Structure of Rig-I in Complex with Cap-0 Rna
Other atoms:
Mg (6);
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5f9f (Zn: 6) - Crystal Structure of Rig-I Helicase-Rd in Complex with 24-Mer Blunt- End Hairpin Rna
Other atoms:
F (12);
Mg (6);
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5f9h (Zn: 6) - Crystal Structure of Rig-I Helicase-Rd in Complex with 24-Mer 5' Triphosphate Hairpin Rna
Other atoms:
Mg (8);
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5f9y (Zn: 2) - Crystal Structure of Prolyl-Trna Synthetase From Cryptosporidium Parvum Complexed with L-Proline and Amp
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5f9z (Zn: 2) - Crystal Structure of Prolyl-Trna Synthetase From Cryptosporidium Parvum Complexed with Halofuginone and Amppnp
Other atoms:
Cl (2);
Br (2);
Mg (2);
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5fb0 (Zn: 4) - Crystal Structure of A Phd Finger Bound to Histone H3 T3PH Peptide
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5fb1 (Zn: 2) - Crystal Structure of A Phd Finger Bound to Histone H3 K9ME3 Peptide
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5fb3 (Zn: 6) - Structure of Glycerophosphate Dehydrogenase in Complex with Nadph
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5fb9 (Zn: 6) - S1 Nuclease From Aspergillus Oryzae with Unoccupied Active Site
Other atoms:
Na (2);
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5fba (Zn: 3) - S1 Nuclease From Aspergillus Oryzae in Complex with Phosphate
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5fbb (Zn: 6) - S1 Nuclease From Aspergillus Oryzae in Complex with Phosphate and Adenosine 5'-Monophosphate
Other atoms:
Ca (5);
Na (3);
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5fbc (Zn: 3) - S1 Nuclease From Aspergillus Oryzae in Complex with 2'-Deoxyadenosine- 5'-Thio-Monophosphate (5'Damp(S)).
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5fbd (Zn: 3) - S1 Nuclease From Aspergillus Oryzae in Complex with Phosphate and 2'- Deoxycytidine
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5fbf (Zn: 3) - S1 Nuclease From Aspergillus Oryzae in Complex with Two Molecules of 2'-Deoxycytidine-5'-Monophosphate
Other atoms:
Na (1);
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5fbg (Zn: 6) - S1 Nuclease From Aspergillus Oryzae, Mutant D65N, in Complex with Phosphate, 2'-Deoxycytidine and 2'-Deoxyguanosine.
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5fbj (Zn: 1) - Complex Structure of JMJD5 and Substrate
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5fc1 (Zn: 2) - Murine SMPDL3A in Complex with Sulfate
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5fc5 (Zn: 2) - Murine SMPDL3A in Complex with Phosphocholine
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5fc6 (Zn: 2) - Murine SMPDL3A in Complex with Adp Analog Ampcp
Page generated: Mon Dec 15 11:34:36 2025
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