Zinc in PDB 9m5x: Cryo-Em Structure of Arabidopsis Thaliana MET1

All present enzymatic activity of Cryo-Em Structure of Arabidopsis Thaliana MET1:
2.1.1.37;

The binding sites of Zinc atom in the Cryo-Em Structure of Arabidopsis Thaliana MET1 (pdb code 9m5x). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of Arabidopsis Thaliana MET1, PDB code: 9m5x:

Zinc binding site 1 out of 1 in the Cryo-Em Structure of Arabidopsis Thaliana MET1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Arabidopsis Thaliana MET1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1601 b:204.8 occ:1.00 NE2 A:HIS773 2.1 149.9 1.0 SG A:CYS800 2.3 153.3 1.0 SG A:CYS883 2.3 175.9 1.0 SG A:CYS880 2.3 171.0 1.0 CB A:CYS800 2.7 138.2 1.0 CE1 A:HIS773 2.7 148.8 1.0 CB A:CYS880 3.2 164.7 1.0 CD2 A:HIS773 3.3 150.2 1.0 CB A:CYS883 3.6 168.4 1.0 N A:CYS883 3.7 163.7 1.0 ND1 A:HIS773 4.0 148.0 1.0 CA A:CYS883 4.1 166.4 1.0 CA A:CYS800 4.1 134.5 1.0 CG A:HIS773 4.3 147.6 1.0 NH2 A:ARG886 4.3 169.6 1.0 OG A:SER882 4.4 161.1 1.0 CB A:SER882 4.5 154.7 1.0 CA A:CYS880 4.6 162.8 1.0 C A:SER882 4.6 157.2 1.0 O A:GLY774 4.8 142.3 1.0 N A:CYS800 4.9 132.3 1.0

A.Kikuchi, A.Nishiyama, Y.Chiba, M.Nakanishi, K.T.To, K.Arita. Cryo-Em Reveals Evolutionarily Conserved and Distinct Structural Features of Plant Cg Maintenance Methyltransferase MET1 To Be Published.