Zinc in PDB 9ga4: MTUVRA2UVRB2 Bound to Damaged Oligonucleotide

The binding sites of Zinc atom in the MTUVRA2UVRB2 Bound to Damaged Oligonucleotide (pdb code 9ga4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the MTUVRA2UVRB2 Bound to Damaged Oligonucleotide, PDB code: 9ga4:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in the MTUVRA2UVRB2 Bound to Damaged Oligonucleotide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of MTUVRA2UVRB2 Bound to Damaged Oligonucleotide within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1001 b:181.8 occ:1.00 SG A:CYS756 2.3 334.4 1.0 SG A:CYS779 2.3 219.1 1.0 SG A:CYS776 2.3 234.5 1.0 SG A:CYS753 2.3 269.0 1.0 CB A:CYS776 2.9 234.5 1.0 CB A:CYS779 3.2 219.1 1.0 CB A:CYS756 3.5 334.4 1.0 N A:CYS756 3.7 334.4 1.0 N A:CYS779 3.9 219.1 1.0 CB A:CYS753 4.0 269.0 1.0 CA A:CYS756 4.1 334.4 1.0 CA A:CYS779 4.2 219.1 1.0 CB A:ALA755 4.3 312.5 1.0 CA A:CYS776 4.4 234.5 1.0 C A:ALA755 4.5 312.5 1.0 NH1 A:ARG783 4.8 226.8 1.0 CB A:VAL778 4.9 232.8 1.0 CA A:ALA755 4.9 312.5 1.0 C A:CYS776 5.0 234.5 1.0 C A:VAL778 5.0 232.8 1.0

Zinc binding site 2 out of 4 in the MTUVRA2UVRB2 Bound to Damaged Oligonucleotide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of MTUVRA2UVRB2 Bound to Damaged Oligonucleotide within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1002 b:293.0 occ:1.00 SG A:CYS282 2.3 217.1 1.0 SG A:CYS415 2.3 216.1 1.0 SG A:CYS412 2.3 246.2 1.0 SG A:CYS285 2.3 233.2 1.0 CB A:CYS282 2.6 217.1 1.0 CB A:CYS285 2.7 233.2 1.0 CB A:CYS412 3.0 246.2 1.0 N A:CYS285 3.4 233.2 1.0 CA A:CYS285 3.7 233.2 1.0 CB A:CYS415 3.9 216.1 1.0 O A:THR418 4.1 187.4 1.0 CA A:CYS282 4.1 217.1 1.0 CA A:CYS412 4.4 246.2 1.0 C A:GLU284 4.6 209.7 1.0 C A:CYS285 4.7 233.2 1.0 C A:CYS282 4.7 217.1 1.0 CA A:GLY417 4.8 186.9 1.0 CG2 A:VAL414 4.8 261.4 1.0 C A:GLY417 4.8 186.9 1.0 N A:CYS282 4.9 217.1 1.0 CB A:GLU284 4.9 209.7 1.0 N A:GLU284 4.9 209.7 1.0 OE1 A:GLU284 4.9 209.7 1.0 N A:CYS415 4.9 216.1 1.0 N A:SER286 4.9 224.9 1.0 O A:CYS282 5.0 217.1 1.0 CA A:CYS415 5.0 216.1 1.0

Zinc binding site 3 out of 4 in the MTUVRA2UVRB2 Bound to Damaged Oligonucleotide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of MTUVRA2UVRB2 Bound to Damaged Oligonucleotide within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn1001 b:290.0 occ:1.00 SG B:CYS756 2.3 206.6 1.0 SG B:CYS779 2.3 211.3 1.0 SG B:CYS776 2.3 232.7 1.0 SG B:CYS753 2.3 189.3 1.0 CB B:CYS776 2.7 232.7 1.0 CB B:CYS756 3.0 206.6 1.0 CB B:CYS779 3.8 211.3 1.0 CB B:CYS753 4.0 189.3 1.0 N B:CYS779 4.1 211.3 1.0 CA B:CYS756 4.1 206.6 1.0 N B:CYS756 4.1 206.6 1.0 CA B:CYS776 4.2 232.7 1.0 CB B:VAL778 4.3 219.7 1.0 CA B:CYS779 4.6 211.3 1.0 O B:TYR784 4.6 194.0 1.0 C B:ALA755 4.7 188.4 1.0 N B:VAL778 4.8 219.7 1.0 CB B:ALA755 4.8 188.4 1.0 CG2 B:VAL778 4.8 219.7 1.0 O B:CYS753 4.8 189.3 1.0 C B:VAL778 4.9 219.7 1.0 C B:CYS776 4.9 232.7 1.0 CA B:VAL778 4.9 219.7 1.0 CA B:GLY760 5.0 207.9 1.0

Zinc binding site 4 out of 4 in the MTUVRA2UVRB2 Bound to Damaged Oligonucleotide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of MTUVRA2UVRB2 Bound to Damaged Oligonucleotide within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn1002 b:229.5 occ:1.00 SG B:CYS285 2.3 179.4 1.0 SG B:CYS415 2.3 155.4 1.0 SG B:CYS282 2.3 156.9 1.0 SG B:CYS412 2.3 153.8 1.0 CB B:CYS285 2.9 179.4 1.0 CB B:CYS415 3.0 155.4 1.0 CB B:CYS282 3.3 156.9 1.0 N B:CYS415 3.9 155.4 1.0 CA B:CYS415 4.1 155.4 1.0 CG1 B:VAL414 4.1 138.9 1.0 CA B:CYS285 4.1 179.4 1.0 CB B:CYS412 4.1 153.8 1.0 NH1 B:ARG291 4.1 183.3 1.0 OE1 B:GLU284 4.2 177.7 1.0 N B:CYS285 4.2 179.4 1.0 O B:LEU288 4.5 177.0 1.0 O B:CYS412 4.6 153.8 1.0 CA B:CYS282 4.7 156.9 1.0 C B:CYS285 4.9 179.4 1.0 N B:ALA416 4.9 163.1 1.0 C B:CYS415 4.9 155.4 1.0

M.Genta, R.Capelli, G.Ferrara, M.Rizzi, F.Rossi, D.Jeruzalmi, M.Bolognesi, A.Chaves-Sanjuan, R.Miggiano. Composite MTUVRA2UVRB2-Dna Structure To Be Published.