Zinc in PDB 8vpm: Glutaminyl Cyclase Apgg, Rod Shape

The structure of Glutaminyl Cyclase Apgg, Rod Shape, PDB code: 8vpm was solved by Q.Nie, C.Chang, Y.Gao, X.Gao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.34 / 2.15
Space group	P 64
Cell size a, b, c (Å), α, β, γ (°)	123.947, 123.947, 46.076, 90, 90, 120
R / Rfree (%)	21.2 / 24.7

The binding sites of Zinc atom in the Glutaminyl Cyclase Apgg, Rod Shape (pdb code 8vpm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Glutaminyl Cyclase Apgg, Rod Shape, PDB code: 8vpm:

Zinc binding site 1 out of 1 in the Glutaminyl Cyclase Apgg, Rod Shape


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Glutaminyl Cyclase Apgg, Rod Shape within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:36.3 occ:0.80 OE2 A:GLU169 1.5 42.3 1.0 OD2 A:ASP121 1.7 40.9 1.0 NE2 A:HIS310 2.0 43.6 1.0 CD A:GLU169 2.6 37.9 1.0 CG A:ASP121 2.7 39.6 1.0 CD2 A:HIS310 3.0 45.3 1.0 OE1 A:GLU169 3.1 41.3 1.0 CE1 A:HIS310 3.1 46.4 1.0 OD1 A:ASP121 3.1 39.4 1.0 NE1 A:TRP309 3.7 41.7 1.0 CG A:GLU169 3.9 38.3 1.0 CB A:ASP121 4.0 41.2 1.0 CG A:HIS310 4.2 49.5 1.0 ND1 A:HIS310 4.2 44.4 1.0 CD1 A:TRP309 4.4 41.2 1.0 CE2 A:TRP309 4.5 44.5 1.0 OE1 A:GLU168 4.6 38.4 1.0 NE2 A:HIS106 4.7 35.7 1.0 CZ2 A:TRP309 4.8 46.8 1.0 CD2 A:LEU217 4.9 35.4 1.0 O A:ASP121 4.9 36.3 1.0

Q.Nie, C.Chang, Y.Gao, X.Gao. Glutaminyl Cyclase Apgg, Rod Shape To Be Published.