Zinc in PDB 8t04: Structure of Mouse Myomaker Bound to FAB18G7 in Nanodiscs

The binding sites of Zinc atom in the Structure of Mouse Myomaker Bound to FAB18G7 in Nanodiscs (pdb code 8t04). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of Mouse Myomaker Bound to FAB18G7 in Nanodiscs, PDB code: 8t04:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of Mouse Myomaker Bound to FAB18G7 in Nanodiscs


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Mouse Myomaker Bound to FAB18G7 in Nanodiscs within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn301 b:132.0 occ:1.00 NE2 A:HIS180 2.1 136.7 1.0 NE2 A:HIS184 2.2 117.1 1.0 NE2 A:HIS48 2.2 131.5 1.0 CE1 A:HIS180 3.0 136.5 1.0 CE1 A:HIS184 3.0 117.2 1.0 CE1 A:HIS48 3.0 131.5 1.0 CD2 A:HIS180 3.1 136.9 1.0 CD2 A:HIS184 3.3 117.2 1.0 CD2 A:HIS48 3.4 132.0 1.0 CG1 A:VAL44 3.6 119.4 1.0 ND1 A:HIS180 4.1 136.6 1.0 CG A:HIS180 4.2 137.3 1.0 ND1 A:HIS184 4.2 117.2 1.0 ND1 A:HIS48 4.2 131.6 1.0 CG A:HIS184 4.4 117.8 1.0 CE2 A:TYR183 4.4 126.5 1.0 CG A:HIS48 4.4 132.7 1.0 CD2 A:TYR183 4.6 126.5 1.0 CB A:VAL44 4.9 119.0 1.0

Zinc binding site 2 out of 2 in the Structure of Mouse Myomaker Bound to FAB18G7 in Nanodiscs


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Mouse Myomaker Bound to FAB18G7 in Nanodiscs within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn301 b:102.4 occ:1.00 NE2 B:HIS184 2.2 79.9 1.0 NE2 B:HIS180 2.3 89.5 1.0 NE2 B:HIS48 2.4 85.4 1.0 CE1 B:HIS184 3.1 79.8 1.0 CD2 B:HIS184 3.2 79.5 1.0 CE1 B:HIS48 3.2 85.7 1.0 CE1 B:HIS180 3.2 89.4 1.0 CD2 B:HIS180 3.4 89.6 1.0 CG1 B:VAL44 3.4 74.8 1.0 CD2 B:HIS48 3.4 85.7 1.0 ND1 B:HIS184 4.2 79.4 1.0 CG B:HIS184 4.3 79.4 1.0 CE2 B:TYR183 4.3 82.3 1.0 ND1 B:HIS180 4.4 89.6 1.0 ND1 B:HIS48 4.4 85.8 1.0 CG B:HIS180 4.5 89.9 1.0 CG B:HIS48 4.5 86.1 1.0 CD2 B:TYR183 4.6 82.0 1.0 CB B:VAL44 4.6 74.7 1.0 CG2 B:VAL44 4.7 74.9 1.0

T.Long, X.Li. Cryo-Em Structures of Myomaker Reveal A Molecular Basis For Myoblast Fusion Nat.Struct.Mol.Biol. 2023.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-023-01110-8