Zinc in PDB 8rr4: Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant with Ordered Flexible Arm and Trna-Tyr Precursor - (Composite Model)

All present enzymatic activity of Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant with Ordered Flexible Arm and Trna-Tyr Precursor - (Composite Model):
1.1.1.159; 1.1.1.178; 1.1.1.239; 1.1.1.35; 1.1.1.53; 1.1.1.62; 2.1.1.218; 2.1.1.221; 3.1.26.11;

The binding sites of Zinc atom in the Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant with Ordered Flexible Arm and Trna-Tyr Precursor - (Composite Model) (pdb code 8rr4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant with Ordered Flexible Arm and Trna-Tyr Precursor - (Composite Model), PDB code: 8rr4:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant with Ordered Flexible Arm and Trna-Tyr Precursor - (Composite Model)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant with Ordered Flexible Arm and Trna-Tyr Precursor - (Composite Model) within 5.0Å range: probe atom residue distance (Å) B Occ E:Zn901 b:355.9 occ:1.00 NE2 E:HIS551 2.0 331.1 1.0 NE2 E:HIS724 2.0 327.8 1.0 OD2 E:ASP666 2.1 336.7 1.0 CE1 E:HIS724 2.6 327.8 1.0 CG E:ASP666 2.8 336.7 1.0 CD2 E:HIS551 2.8 331.1 1.0 OD1 E:ASP666 2.9 336.7 1.0 CE1 E:HIS551 3.0 331.1 1.0 CD2 E:HIS724 3.3 327.8 1.0 ZN E:ZN902 3.6 382.9 1.0 O E:SER490 3.8 327.8 1.0 ND1 E:HIS724 3.8 327.8 1.0 CE1 E:HIS546 3.9 352.6 1.0 CG E:HIS551 3.9 331.1 1.0 ND1 E:HIS551 3.9 331.1 1.0 NE2 E:HIS546 4.1 352.6 1.0 CG E:HIS724 4.2 327.8 1.0 OD1 E:ASN550 4.2 332.6 1.0 CB E:ASP666 4.3 336.7 1.0 C E:SER490 4.7 327.8 1.0 ND1 E:HIS548 4.7 356.3 1.0 CA E:SER490 4.9 327.8 1.0 CE1 E:HIS702 5.0 330.8 1.0 OG E:SER500 5.0 312.7 1.0

Zinc binding site 2 out of 2 in the Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant with Ordered Flexible Arm and Trna-Tyr Precursor - (Composite Model)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Human Mitochondrial Rnase Z Complex with ELAC2-D550N Catalytic Mutant with Ordered Flexible Arm and Trna-Tyr Precursor - (Composite Model) within 5.0Å range: probe atom residue distance (Å) B Occ E:Zn902 b:382.9 occ:1.00 NE2 E:HIS546 2.0 352.6 1.0 NE2 E:HIS644 2.1 346.5 1.0 ND1 E:HIS548 2.1 356.3 1.0 OD2 E:ASP666 2.1 336.7 1.0 CE1 E:HIS548 2.7 356.3 1.0 CE1 E:HIS644 2.8 346.5 1.0 CD2 E:HIS546 2.9 352.6 1.0 CE1 E:HIS546 3.0 352.6 1.0 CG E:ASP666 3.0 336.7 1.0 CD2 E:HIS644 3.0 346.5 1.0 CG E:HIS548 3.2 356.3 1.0 CB E:ASP666 3.2 336.7 1.0 ZN E:ZN901 3.6 355.9 1.0 ND1 E:HIS644 3.8 346.5 1.0 NE2 E:HIS548 3.8 356.3 1.0 CB E:HIS548 3.8 356.3 1.0 CG E:HIS546 3.9 352.6 1.0 ND1 E:HIS546 3.9 352.6 1.0 CG E:HIS644 4.0 346.5 1.0 CD2 E:HIS548 4.1 356.3 1.0 OD1 E:ASP666 4.2 336.7 1.0 NE2 E:HIS702 4.7 330.8 1.0 CA E:ASP666 4.8 336.7 1.0 NE2 E:HIS551 4.8 331.1 1.0

A.Bhatta, B.Kuhle, R.D.Yu, K.Ditter, H.S.Hillen. Structural Basis of Human Mitochondrial and Nuclear Trna 3'-End Processing To Be Published.