Zinc in PDB 8rl5: Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006

All present enzymatic activity of Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006:
3.6.4.12;

The binding sites of Zinc atom in the Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006 (pdb code 8rl5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006, PDB code: 8rl5:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn501 b:180.9 occ:1.00 SG A:CYS411 2.3 156.7 1.0 SG A:CYS431 2.3 169.2 1.0 SG A:CYS434 2.3 181.7 1.0 SG A:CYS427 2.3 163.9 1.0 HB3 A:CYS431 2.8 169.2 1.0 CB A:CYS431 2.9 169.2 1.0 HB2 A:CYS431 2.9 169.2 1.0 HB2 A:CYS411 3.0 156.7 1.0 CB A:CYS411 3.2 156.7 1.0 HA A:CYS411 3.4 156.7 1.0 HB2 A:CYS434 3.5 181.7 1.0 CB A:CYS434 3.6 181.7 1.0 H A:CYS434 3.7 181.7 1.0 CA A:CYS411 3.8 156.7 1.0 HB2 A:HIS413 3.9 153.3 1.0 HB3 A:CYS411 4.1 156.7 1.0 CB A:CYS427 4.1 163.9 1.0 H A:HIS413 4.1 153.3 1.0 H A:ARG412 4.1 149.1 1.0 HB3 A:CYS434 4.2 181.7 1.0 O A:CYS427 4.3 163.9 1.0 HB2 A:CYS427 4.3 163.9 1.0 HG2 A:PRO425 4.4 156.4 1.0 N A:CYS434 4.4 181.7 1.0 CA A:CYS431 4.4 169.2 1.0 H A:ALA414 4.5 153.1 1.0 C A:CYS411 4.5 156.7 1.0 N A:ARG412 4.5 149.1 1.0 H A:CYS427 4.5 163.9 1.0 HB3 A:CYS427 4.6 163.9 1.0 CA A:CYS434 4.6 181.7 1.0 HA A:CYS431 4.7 169.2 1.0 N A:HIS413 4.8 153.3 1.0 CB A:HIS413 4.8 153.3 1.0 CA A:CYS427 5.0 163.9 1.0

Zinc binding site 2 out of 2 in the Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006 within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn501 b:183.9 occ:1.00 SG B:CYS434 2.3 164.8 1.0 SG B:CYS427 2.3 154.6 1.0 SG B:CYS431 2.3 150.0 1.0 SG B:CYS411 2.3 142.6 1.0 HB3 B:CYS431 2.8 150.0 1.0 CB B:CYS431 2.9 150.0 1.0 HB3 B:CYS411 2.9 142.6 1.0 HB2 B:CYS431 3.0 150.0 1.0 CB B:CYS411 3.2 142.6 1.0 H B:CYS434 3.4 164.8 1.0 HB2 B:CYS434 3.6 164.8 1.0 CB B:CYS434 3.6 164.8 1.0 O B:CYS427 3.7 154.6 1.0 HA B:CYS411 3.7 142.6 1.0 HB2 B:CYS427 3.8 154.6 1.0 CB B:CYS427 3.8 154.6 1.0 HB3 B:HIS433 3.9 151.3 1.0 HB2 B:CYS411 4.0 142.6 1.0 N B:CYS434 4.0 164.8 1.0 CA B:CYS411 4.1 142.6 1.0 HB3 B:CYS434 4.4 164.8 1.0 CA B:CYS434 4.4 164.8 1.0 CA B:CYS431 4.4 150.0 1.0 HB3 B:CYS427 4.4 154.6 1.0 HA B:CYS434 4.6 164.8 1.0 C B:CYS427 4.6 154.6 1.0 HD2 B:HIS433 4.6 151.3 1.0 H B:CYS427 4.7 154.6 1.0 H B:HIS433 4.7 151.3 1.0 CA B:CYS427 4.7 154.6 1.0 HA B:CYS431 4.8 150.0 1.0 H B:ARG412 4.8 131.1 1.0 HG2 B:PRO425 4.8 139.9 1.0 HD2 B:HIS413 4.8 142.7 1.0 CB B:HIS433 4.8 151.3 1.0 C B:CYS431 4.9 150.0 1.0 HB2 B:HIS413 5.0 142.7 1.0 N B:CYS411 5.0 142.6 1.0

G.Yi, D.Mamalis, M.Ye, L.Carrique, M.Fairhead, H.Li, K.Duerr, P.Zhang, D.B.Sauer, F.Von Delft, B.G.Davis, R.J.C.Gilbert. Di-Gluebodies: Rigid Modular Nanobody Protein Assemblies Enabling Simultaneous Determination of High-Resolution Cryo-Em Structures To Be Published.