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Zinc in PDB 8p31: Structure of Human SIT1:ACE2 Complex (Closed Pd Conformation) Bound to L-Pipecolate

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Human SIT1:ACE2 Complex (Closed Pd Conformation) Bound to L-Pipecolate (pdb code 8p31). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of Human SIT1:ACE2 Complex (Closed Pd Conformation) Bound to L-Pipecolate, PDB code: 8p31:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8p31

Go back to Zinc Binding Sites List in 8p31
Zinc binding site 1 out of 2 in the Structure of Human SIT1:ACE2 Complex (Closed Pd Conformation) Bound to L-Pipecolate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Human SIT1:ACE2 Complex (Closed Pd Conformation) Bound to L-Pipecolate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn901

b:142.2
occ:1.00
OE2 A:GLU402 2.2 110.5 1.0
NE2 A:HIS378 2.3 125.1 1.0
NE2 A:HIS374 2.3 128.6 1.0
OE1 A:GLU402 2.7 110.5 1.0
CD A:GLU402 2.8 110.5 1.0
CD2 A:HIS378 3.1 125.1 1.0
CE1 A:HIS374 3.2 128.6 1.0
CE1 A:HIS378 3.2 125.1 1.0
CD2 A:HIS374 3.4 128.6 1.0
CG A:HIS378 4.2 125.1 1.0
ND1 A:HIS378 4.2 125.1 1.0
OE2 A:GLU375 4.3 138.0 1.0
CG A:GLU402 4.3 110.5 1.0
ND1 A:HIS374 4.4 128.6 1.0
CG A:HIS374 4.5 128.6 1.0

Zinc binding site 2 out of 2 in 8p31

Go back to Zinc Binding Sites List in 8p31
Zinc binding site 2 out of 2 in the Structure of Human SIT1:ACE2 Complex (Closed Pd Conformation) Bound to L-Pipecolate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Human SIT1:ACE2 Complex (Closed Pd Conformation) Bound to L-Pipecolate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn901

b:142.2
occ:1.00
OE2 B:GLU402 2.2 110.5 1.0
NE2 B:HIS378 2.3 125.1 1.0
NE2 B:HIS374 2.3 128.6 1.0
OE1 B:GLU402 2.7 110.5 1.0
CD B:GLU402 2.8 110.5 1.0
CD2 B:HIS378 3.1 125.1 1.0
CE1 B:HIS374 3.2 128.6 1.0
CE1 B:HIS378 3.2 125.1 1.0
CD2 B:HIS374 3.4 128.6 1.0
CG B:HIS378 4.2 125.1 1.0
ND1 B:HIS378 4.2 125.1 1.0
OE2 B:GLU375 4.3 138.0 1.0
CG B:GLU402 4.3 110.5 1.0
ND1 B:HIS374 4.4 128.6 1.0
CG B:HIS374 4.5 128.6 1.0

Reference:

H.Z.Li, A.C.W.Pike, G.Chi, J.S.Hansen, S.G.Lee, K.E.J.Rodstrom, S.R.Bushell, D.Speedman, A.Evans, D.Wang, D.He, L.Shrestha, C.Nasrallah, N.A.Burgess-Brown, T.R.Dafforn, E.P.Carpenter, D.B.Sauer. Structure and Function of the SIT1 Proline Transporter in Complex with the Covid-19 Receptor ACE2 To Be Published.
Page generated: Thu Oct 31 09:05:08 2024

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