Zinc in PDB 8omr: Human Trna Guanine Transglycosylase (Tgt) Bound to Trnaasp

All present enzymatic activity of Human Trna Guanine Transglycosylase (Tgt) Bound to Trnaasp:
2.4.2.29;

The binding sites of Zinc atom in the Human Trna Guanine Transglycosylase (Tgt) Bound to Trnaasp (pdb code 8omr). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Human Trna Guanine Transglycosylase (Tgt) Bound to Trnaasp, PDB code: 8omr:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Human Trna Guanine Transglycosylase (Tgt) Bound to Trnaasp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Human Trna Guanine Transglycosylase (Tgt) Bound to Trnaasp within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn501 b:65.6 occ:1.00 ND1 A:HIS348 2.1 58.6 1.0 SG A:CYS319 2.3 58.0 1.0 SG A:CYS322 2.3 66.0 1.0 SG A:CYS317 2.3 71.5 1.0 CE1 A:HIS348 2.6 54.9 1.0 CB A:CYS322 3.2 62.6 1.0 CB A:CYS319 3.3 61.7 1.0 CB A:CYS317 3.4 74.4 1.0 CG A:HIS348 3.4 52.7 1.0 NE2 A:HIS348 3.8 50.9 1.0 N A:CYS319 3.9 65.9 1.0 CB A:HIS348 4.1 48.6 1.0 N A:CYS322 4.1 62.9 1.0 CA A:CYS319 4.2 64.2 1.0 CD2 A:HIS348 4.2 50.5 1.0 CA A:CYS322 4.3 61.5 1.0 CA A:HIS348 4.5 47.0 1.0 CA A:CYS317 4.8 76.9 1.0 O A:CYS319 4.8 68.5 1.0 N A:THR318 4.8 71.8 1.0 C A:CYS319 4.8 64.2 1.0

Zinc binding site 2 out of 2 in the Human Trna Guanine Transglycosylase (Tgt) Bound to Trnaasp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Human Trna Guanine Transglycosylase (Tgt) Bound to Trnaasp within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn501 b:61.8 occ:1.00 ND1 B:HIS382 2.1 56.3 1.0 SG B:CYS351 2.3 61.7 1.0 SG B:CYS356 2.3 67.6 1.0 SG B:CYS353 2.3 70.1 1.0 CE1 B:HIS382 2.9 56.1 1.0 CB B:CYS351 3.1 69.6 1.0 CG B:HIS382 3.3 49.5 1.0 CB B:CYS356 3.4 69.5 1.0 CB B:CYS353 3.7 67.7 1.0 CB B:HIS382 3.7 48.9 1.0 NE2 B:HIS382 4.1 49.9 1.0 N B:CYS356 4.2 62.2 1.0 CA B:HIS382 4.2 47.6 1.0 CD2 B:HIS382 4.3 48.8 1.0 N B:CYS353 4.3 67.6 1.0 CA B:CYS356 4.4 71.3 1.0 CA B:CYS351 4.5 74.2 1.0 CA B:CYS353 4.5 66.0 1.0 C B:CYS351 4.7 79.8 1.0 N B:SER352 5.0 79.7 1.0 O B:HIS382 5.0 52.3 1.0

K.Sievers, K.Ficner. Novel Structural and Functional Insights Into Human Trna Guanine Transglycosylase Structure 2023.
ISSN: ISSN 0969-2126