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Zinc in PDB 8jhf: Native SUV420H1 Bound to 167-Bp Nucleosome

Enzymatic activity of Native SUV420H1 Bound to 167-Bp Nucleosome

All present enzymatic activity of Native SUV420H1 Bound to 167-Bp Nucleosome:
2.1.1.361; 2.1.1.362;

Zinc Binding Sites:

The binding sites of Zinc atom in the Native SUV420H1 Bound to 167-Bp Nucleosome (pdb code 8jhf). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Native SUV420H1 Bound to 167-Bp Nucleosome, PDB code: 8jhf:

Zinc binding site 1 out of 1 in 8jhf

Go back to Zinc Binding Sites List in 8jhf
Zinc binding site 1 out of 1 in the Native SUV420H1 Bound to 167-Bp Nucleosome


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Native SUV420H1 Bound to 167-Bp Nucleosome within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Zn401

b:186.7
occ:1.00
SG K:CYS319 2.3 145.4 1.0
SG K:CYS324 2.3 143.3 1.0
SG K:CYS321 2.3 141.9 1.0
CB K:CYS324 2.6 143.3 1.0
SG K:CYS275 3.3 133.9 1.0
CB K:CYS321 3.5 141.9 1.0
CB K:CYS319 3.6 145.4 1.0
O K:CYS319 3.9 145.4 1.0
CA K:CYS324 4.1 143.3 1.0
CB K:CYS275 4.2 133.9 1.0
N K:CYS321 4.3 141.9 1.0
O K:ASN315 4.4 137.2 1.0
N K:CYS324 4.5 143.3 1.0
CA K:CYS321 4.5 141.9 1.0
C K:CYS319 4.5 145.4 1.0
NH2 K:ARG327 4.5 134.7 1.0
CG K:ASN316 4.7 139.6 1.0
CA K:CYS319 4.7 145.4 1.0
OD1 K:ASN316 4.8 139.6 1.0
NH1 K:ARG327 4.9 134.7 1.0
ND2 K:ASN316 4.9 139.6 1.0
CB K:ASN316 4.9 139.6 1.0
CA K:GLY330 5.0 135.3 1.0

Reference:

F.Lin, W.Li. Structural Basis of Nucleosomal H4K20 Recognition and Methylation By SUV420H1 Methyltransferase To Be Published.
Page generated: Fri Aug 22 11:29:14 2025

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