Zinc in PDB 8jfw: Cryo-Em Structure of Rdgc/Apo-Cam Complex

All present enzymatic activity of Cryo-Em Structure of Rdgc/Apo-Cam Complex:
3.1.3.16;

The structure of Cryo-Em Structure of Rdgc/Apo-Cam Complex also contains other interesting chemical elements:

Iron

(Fe)

1 atom

The binding sites of Zinc atom in the Cryo-Em Structure of Rdgc/Apo-Cam Complex (pdb code 8jfw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of Rdgc/Apo-Cam Complex, PDB code: 8jfw:

Zinc binding site 1 out of 1 in the Cryo-Em Structure of Rdgc/Apo-Cam Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Rdgc/Apo-Cam Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn702 b:42.9 occ:1.00 OD1 D:ASN219 2.0 31.8 1.0 OD2 D:ASP187 2.1 34.8 1.0 NE2 D:HIS271 2.3 31.7 1.0 CE1 D:HIS271 2.4 31.7 1.0 CD2 D:HIS360 2.6 37.8 1.0 CG D:ASP187 3.0 34.8 1.0 CG D:ASN219 3.1 31.8 1.0 FE D:FE701 3.2 43.9 1.0 NE2 D:HIS360 3.2 37.8 1.0 OD1 D:ASP187 3.2 34.8 1.0 ND2 D:ASN219 3.5 31.8 1.0 CD2 D:HIS271 3.7 31.7 1.0 OD2 D:ASP158 3.7 32.5 1.0 CG D:HIS360 3.7 37.8 1.0 ND1 D:HIS271 3.8 31.7 1.0 CA D:HIS360 4.1 37.8 1.0 O D:HIS360 4.1 37.8 1.0 CG D:HIS271 4.4 31.7 1.0 CB D:ASP187 4.4 34.8 1.0 CB D:ASN219 4.4 31.8 1.0 CE1 D:HIS360 4.5 37.8 1.0 CB D:HIS360 4.5 37.8 1.0 N D:ASN219 4.6 31.8 1.0 CG D:ASP158 4.6 32.5 1.0 C D:HIS360 4.6 37.8 1.0 CD2 D:HIS220 4.6 29.6 1.0 ND1 D:HIS360 4.7 37.8 1.0 O D:SER359 4.9 51.6 1.0 OD1 D:ASP158 5.0 32.5 1.0

Z.M.Liu, W.Liu, C.Wu, J.Liu. Cryo-Em Structure of Rdgc/Apo-Cam Complex To Be Published.