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Zinc in PDB 8cli: Tfiiic Taub-Dna Monomer

Enzymatic activity of Tfiiic Taub-Dna Monomer

All present enzymatic activity of Tfiiic Taub-Dna Monomer:
2.3.1.48;

Zinc Binding Sites:

The binding sites of Zinc atom in the Tfiiic Taub-Dna Monomer (pdb code 8cli). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Tfiiic Taub-Dna Monomer, PDB code: 8cli:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8cli

Go back to Zinc Binding Sites List in 8cli
Zinc binding site 1 out of 2 in the Tfiiic Taub-Dna Monomer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Tfiiic Taub-Dna Monomer within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn901

b:165.1
occ:1.00
ND1 B:HIS768 2.1 121.4 1.0
SG B:CYS750 2.3 130.5 1.0
SG B:CYS747 2.3 123.0 1.0
SG B:CYS764 2.3 132.0 1.0
CG B:HIS768 2.8 120.3 1.0
CE1 B:HIS768 2.8 120.1 1.0
CB B:HIS768 3.3 117.2 1.0
CB B:CYS747 3.5 117.3 1.0
CB B:CYS750 3.5 126.6 1.0
NE2 B:HIS768 3.6 119.5 1.0
CD2 B:HIS768 3.6 121.0 1.0
CB B:CYS764 3.7 127.8 1.0
N B:CYS750 4.3 128.3 1.0
CB B:ASN766 4.4 129.9 1.0
CB B:LEU749 4.4 112.6 1.0
N B:HIS768 4.4 120.4 1.0
CA B:HIS768 4.4 118.9 1.0
C B:LEU749 4.5 116.5 1.0
OD1 B:ASN766 4.5 129.4 1.0
NE1 B:TRP770 4.5 96.1 1.0
CA B:CYS750 4.6 127.3 1.0
CG B:ASN766 4.7 130.5 1.0
CA B:CYS747 4.8 118.2 1.0
CA B:LEU749 4.8 114.1 1.0
N B:LEU749 4.9 113.8 1.0
O B:LEU749 4.9 116.5 1.0
CA B:CYS764 5.0 127.2 1.0
O B:CYS747 5.0 116.3 1.0

Zinc binding site 2 out of 2 in 8cli

Go back to Zinc Binding Sites List in 8cli
Zinc binding site 2 out of 2 in the Tfiiic Taub-Dna Monomer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Tfiiic Taub-Dna Monomer within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn902

b:148.7
occ:1.00
OD1 B:ASP792 2.0 73.7 1.0
OD2 B:ASP792 2.0 74.2 1.0
OG B:SER793 2.1 90.3 1.0
CG B:ASP792 2.2 73.2 1.0
SG B:CYS814 2.3 81.4 1.0
SG B:CYS788 2.3 64.4 1.0
SG B:CYS817 2.3 79.1 1.0
CB B:CYS788 3.0 55.6 1.0
CB B:CYS814 3.0 68.5 1.0
CB B:SER793 3.0 76.6 1.0
N B:SER793 3.3 71.1 1.0
CB B:ASP792 3.6 62.9 1.0
CA B:SER793 3.8 63.2 1.0
C B:ASP792 3.8 67.3 1.0
CB B:CYS817 3.9 72.8 1.0
CA B:ASP792 4.1 64.7 1.0
N B:CYS817 4.2 74.8 1.0
N B:ASP792 4.3 68.8 1.0
CA B:CYS788 4.4 51.9 1.0
CA B:CYS814 4.5 69.2 1.0
O B:ASP792 4.5 68.2 1.0
C B:SER793 4.6 61.0 1.0
O B:SER793 4.6 68.5 1.0
CA B:CYS817 4.7 72.1 1.0
CB B:PHE816 4.8 68.1 1.0

Reference:

S.D.Wolfram, G.Mathias, H.Luis, H.Thomas, E.Sebastian, M.Christoph. Cryo-Em Structures of Human Tfiiic Reveal A Multi-Step Mechanism For Trna Gene Promoter Recognition To Be Published.
Page generated: Wed Oct 30 18:46:01 2024

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