Zinc in PDB 7yer: The Structure of Ebov L-VP35 Complex

The binding sites of Zinc atom in the The Structure of Ebov L-VP35 Complex (pdb code 7yer). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Structure of Ebov L-VP35 Complex, PDB code: 7yer:

Zinc binding site 1 out of 1 in the The Structure of Ebov L-VP35 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Structure of Ebov L-VP35 Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2301 b:88.3 occ:1.00 NE2 A:HIS1347 2.1 55.2 1.0 ND1 A:HIS1345 2.1 50.2 1.0 SG A:CYS1153 2.3 79.4 1.0 SG A:CYS1150 2.3 77.7 1.0 CE1 A:HIS1347 2.8 55.2 1.0 CB A:CYS1150 2.9 77.7 1.0 CE1 A:HIS1345 3.0 50.2 1.0 CG A:HIS1345 3.1 50.2 1.0 CD2 A:HIS1347 3.2 55.2 1.0 CB A:HIS1345 3.5 50.2 1.0 CB A:CYS1153 3.7 79.4 1.0 ND1 A:HIS1347 4.0 55.2 1.0 N A:CYS1153 4.1 79.4 1.0 NE2 A:HIS1345 4.1 50.2 1.0 CD2 A:HIS1345 4.2 50.2 1.0 CG A:HIS1347 4.2 55.2 1.0 CA A:CYS1150 4.4 77.7 1.0 CA A:CYS1153 4.4 79.4 1.0 CD2 A:PHE1164 4.5 55.4 1.0 CG A:PHE1164 4.6 55.4 1.0 CE2 A:PHE1164 4.7 55.4 1.0 CB A:GLN1152 4.7 77.9 1.0 CD1 A:PHE1164 4.8 55.4 1.0 CD1 A:LEU1144 4.9 56.2 1.0 CG2 A:VAL1142 4.9 44.2 1.0 CZ A:PHE1164 4.9 55.4 1.0 CA A:HIS1345 5.0 50.2 1.0 CE1 A:PHE1164 5.0 55.4 1.0 C A:GLN1152 5.0 77.9 1.0

B.Yuan, Q.Peng, J.Cheng, M.Wang, J.Zhong, J.Qi, G.F.Gao, Y.Shi. Structure of the Ebola Virus Polymerase Complex. Nature V. 610 394 2022.
ISSN: ESSN 1476-4687
PubMed: 36171293
DOI: 10.1038/S41586-022-05271-2