Zinc in PDB 7vfr: Glta N83K Mutant From Bifidobacterium Infantis Jcm 1222 Complexed with Lacto-N-Tetraose

The structure of Glta N83K Mutant From Bifidobacterium Infantis Jcm 1222 Complexed with Lacto-N-Tetraose, PDB code: 7vfr was solved by M.Sato, M.Sakanaka, T.Katayama, S.Fushinobu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.29 / 1.56
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	39.995, 42.39, 59.605, 107.05, 102.06, 104.29
R / Rfree (%)	15 / 18.8

The binding sites of Zinc atom in the Glta N83K Mutant From Bifidobacterium Infantis Jcm 1222 Complexed with Lacto-N-Tetraose (pdb code 7vfr). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Glta N83K Mutant From Bifidobacterium Infantis Jcm 1222 Complexed with Lacto-N-Tetraose, PDB code: 7vfr:

Zinc binding site 1 out of 1 in the Glta N83K Mutant From Bifidobacterium Infantis Jcm 1222 Complexed with Lacto-N-Tetraose


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Glta N83K Mutant From Bifidobacterium Infantis Jcm 1222 Complexed with Lacto-N-Tetraose within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn503 b:24.6 occ:1.00 OE2 A:GLU438 2.1 20.9 1.0 O A:HOH654 2.2 24.0 1.0 CD A:GLU438 3.0 23.0 1.0 OE1 A:GLU438 3.3 21.6 1.0 CG A:GLU438 4.4 22.2 1.0

M.Sakanaka, M.Sato, S.Fushinobu, T.Katayama. Short Stretch Sequence of A Milk Oligosaccharide Transporter Represents the Phenotypic Selection Trajectory in Infant Gut Microbiome To Be Published.