Zinc in PDB 7ppp: Crystal Structure of Zad-Domain of ZNF_276 Protein From Rabbit.

The structure of Crystal Structure of Zad-Domain of ZNF_276 Protein From Rabbit., PDB code: 7ppp was solved by K.M.Boyko, A.N.Bonchuk, A.Y.Nikolaeva, P.G.Georgiev, V.O.Popov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.10 / 2.90
Space group	P 63 2 2
Cell size a, b, c (Å), α, β, γ (°)	82.94, 82.94, 134.32, 90, 90, 120
R / Rfree (%)	30.7 / 36.2

The binding sites of Zinc atom in the Crystal Structure of Zad-Domain of ZNF_276 Protein From Rabbit. (pdb code 7ppp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Zad-Domain of ZNF_276 Protein From Rabbit., PDB code: 7ppp:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Zad-Domain of ZNF_276 Protein From Rabbit.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Zad-Domain of ZNF_276 Protein From Rabbit. within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn101 b:100.1 occ:1.00 SG A:CYS4 2.2 110.6 1.0 SG A:CYS7 2.3 102.2 1.0 SG A:CYS61 2.3 82.3 1.0 SG A:CYS64 2.4 88.7 1.0 CB A:CYS64 3.2 100.7 1.0 CB A:CYS4 3.3 121.8 1.0 CB A:CYS61 3.3 52.8 1.0 O A:LEU6 3.4 98.2 1.0 CB A:CYS7 3.5 124.6 1.0 NZ A:LYS10 3.8 153.3 1.0 C A:LEU6 3.8 103.1 1.0 N A:CYS61 3.9 84.0 1.0 CA A:CYS61 4.1 79.2 1.0 N A:CYS7 4.2 83.7 1.0 CA A:CYS7 4.3 107.6 1.0 N A:HIS8 4.4 110.0 1.0 CA A:CYS64 4.5 102.5 1.0 CB A:LEU6 4.6 114.7 1.0 CA A:LEU6 4.6 110.7 1.0 CA A:CYS4 4.7 106.6 1.0 N A:CYS64 4.7 100.3 1.0 C A:CYS61 4.8 89.3 1.0 C A:CYS7 4.9 108.5 1.0 N A:LEU6 4.9 96.5 1.0 O A:CYS61 4.9 124.8 1.0 CE A:LYS10 4.9 128.8 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Zad-Domain of ZNF_276 Protein From Rabbit.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Zad-Domain of ZNF_276 Protein From Rabbit. within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn101 b:101.5 occ:1.00 SG B:CYS7 2.1 82.6 1.0 SG B:CYS64 2.3 96.4 1.0 SG B:CYS61 2.3 108.8 1.0 SG B:CYS4 2.4 110.7 1.0 CB B:CYS61 2.7 131.1 1.0 CB B:CYS7 3.0 97.7 1.0 CB B:CYS4 3.3 135.0 1.0 N B:CYS7 3.5 82.0 1.0 CB B:CYS64 3.5 87.6 1.0 CA B:CYS7 3.8 84.5 1.0 O B:VAL60 3.8 181.2 1.0 O B:GLY9 4.1 167.4 1.0 CA B:CYS61 4.1 136.1 1.0 C B:LEU6 4.4 91.1 1.0 C B:VAL60 4.5 147.8 1.0 C B:CYS7 4.5 87.1 1.0 N B:CYS61 4.6 117.3 1.0 CA B:CYS64 4.7 104.5 1.0 CA B:CYS4 4.8 135.4 1.0 N B:CYS64 4.9 131.9 1.0 CB B:LEU6 4.9 70.8 1.0 N B:HIS8 4.9 98.7 1.0 N B:LEU6 5.0 99.7 1.0 C B:CYS61 5.0 135.0 1.0 CA B:LEU6 5.0 91.8 1.0

A.N.Bonchuk, K.M.Boyko, A.Y.Nikolaeva, A.D.Burtseva, V.O.Popov, P.G.Georgiev. Structural Insights Into Highly Similar Spatial Organization of Zinc-Finger Associated (Zad) Domains with A Very Low Sequence Similarity To Be Published.