Zinc in PDB 7f1t: Crystal Structure of the Human Chemokine Receptor CCR5 in Complex with Mip-1A

Protein crystallography data

The structure of Crystal Structure of the Human Chemokine Receptor CCR5 in Complex with Mip-1A, PDB code: 7f1t was solved by H.Zhang, K.Chen, Q.Tan, S.Han, Y.Zhu, Q.Zhao, B.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.60
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 49.133, 204.356, 69.012, 90, 105.53, 90
R / Rfree (%) 22.8 / 27.1

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Human Chemokine Receptor CCR5 in Complex with Mip-1A (pdb code 7f1t). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Human Chemokine Receptor CCR5 in Complex with Mip-1A, PDB code: 7f1t:

Zinc binding site 1 out of 1 in 7f1t

Go back to Zinc Binding Sites List in 7f1t
Zinc binding site 1 out of 1 in the Crystal Structure of the Human Chemokine Receptor CCR5 in Complex with Mip-1A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Human Chemokine Receptor CCR5 in Complex with Mip-1A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1101

b:225.4
occ:1.00
SG A:CYS1039 2.1 117.8 1.0
SG A:CYS1006 2.1 127.9 1.0
CB A:CYS1009 2.1 118.4 1.0
SG A:CYS1042 2.2 132.8 1.0
SG A:CYS1009 2.6 108.4 1.0
CB A:CYS1006 2.9 137.7 1.0
CB A:CYS1039 3.1 125.0 1.0
CB A:CYS1042 3.3 130.6 1.0
CA A:CYS1009 3.6 125.3 1.0
CG2 A:VAL1044 4.0 149.8 1.0
N A:CYS1009 4.0 134.2 1.0
N A:CYS1042 4.1 132.6 1.0
CG1 A:VAL1008 4.2 139.2 1.0
CA A:CYS1042 4.2 136.0 1.0
CA A:CYS1006 4.4 132.3 1.0
CB A:TYR1011 4.5 130.3 1.0
CA A:CYS1039 4.6 126.2 1.0
C A:CYS1009 4.6 122.3 1.0
N A:GLY1043 4.7 132.4 1.0
C A:CYS1006 4.8 128.8 1.0
O A:CYS1006 4.8 126.9 1.0
N A:GLY1010 4.9 126.1 1.0
C A:CYS1042 4.9 138.0 1.0
N A:VAL1044 5.0 142.4 1.0

Reference:

H.Zhang, K.Chen, Q.Tan, S.Han, Y.Zhu, Q.Zhao, B.Wu. Structural Basis For Chemokine Recognition and Receptor Activation of Chemokine Receptor CCR5 To Be Published.
Page generated: Sun Aug 22 09:42:43 2021

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