Zinc in PDB 7d6l: Crystal Structure of TRX2 From D. Radiodurans R1

Protein crystallography data

The structure of Crystal Structure of TRX2 From D. Radiodurans R1, PDB code: 7d6l was solved by M.-K.Kim, J.Zhang, L.Zhao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.94 / 1.95
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 101.887, 57.819, 36.152, 90, 94.78, 90
R / Rfree (%) 19.1 / 22.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of TRX2 From D. Radiodurans R1 (pdb code 7d6l). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of TRX2 From D. Radiodurans R1, PDB code: 7d6l:

Zinc binding site 1 out of 1 in 7d6l

Go back to Zinc Binding Sites List in 7d6l
Zinc binding site 1 out of 1 in the Crystal Structure of TRX2 From D. Radiodurans R1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of TRX2 From D. Radiodurans R1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:25.7
occ:1.00
SG A:CYS30 2.2 26.9 1.0
SG A:CYS10 2.3 30.7 1.0
SG A:CYS7 2.3 27.1 1.0
SG A:CYS27 2.4 24.9 1.0
CB A:CYS27 3.1 18.3 1.0
CB A:CYS7 3.1 20.0 1.0
CB A:CYS30 3.3 26.1 1.0
CB A:CYS10 3.3 35.2 1.0
N A:CYS10 3.7 33.4 1.0
N A:CYS30 3.8 25.1 1.0
CA A:CYS10 4.1 26.1 1.0
CA A:CYS30 4.1 29.6 1.0
CB A:ALA12 4.4 26.5 1.0
CA A:CYS7 4.6 17.7 1.0
CA A:CYS27 4.6 23.1 1.0
C A:CYS10 4.7 32.5 1.0
CB A:ARG29 4.7 25.9 1.0
C A:CYS30 4.7 30.0 1.0
N A:ALA12 4.7 32.4 1.0
C A:HIS9 4.8 32.3 1.0
CB A:HIS9 4.8 27.2 1.0
N A:GLN11 4.8 30.2 1.0
N A:GLY31 4.8 30.4 1.0
C A:ARG29 4.9 36.2 1.0
CB A:ALA32 4.9 24.1 1.0
N A:ALA32 4.9 25.0 1.0

Reference:

M.-K.Kim, J.Zhang, L.Zhao. Crystal Structure of TRX2 From D. Radiodurans R1 To Be Published.
Page generated: Fri Nov 5 16:49:51 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy