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Zinc in PDB 7ak5: Cryo-Em Structure of Respiratory Complex I in the Deactive State From Mus Musculus at 3.2 A

Enzymatic activity of Cryo-Em Structure of Respiratory Complex I in the Deactive State From Mus Musculus at 3.2 A

All present enzymatic activity of Cryo-Em Structure of Respiratory Complex I in the Deactive State From Mus Musculus at 3.2 A:
7.1.1.2;

Other elements in 7ak5:

The structure of Cryo-Em Structure of Respiratory Complex I in the Deactive State From Mus Musculus at 3.2 A also contains other interesting chemical elements:

Iron (Fe) 28 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em Structure of Respiratory Complex I in the Deactive State From Mus Musculus at 3.2 A (pdb code 7ak5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of Respiratory Complex I in the Deactive State From Mus Musculus at 3.2 A, PDB code: 7ak5:

Zinc binding site 1 out of 1 in 7ak5

Go back to Zinc Binding Sites List in 7ak5
Zinc binding site 1 out of 1 in the Cryo-Em Structure of Respiratory Complex I in the Deactive State From Mus Musculus at 3.2 A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Respiratory Complex I in the Deactive State From Mus Musculus at 3.2 A within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Zn201

b:35.4
occ:1.00
NE2 R:HIS68 2.1 17.2 1.0
SG R:CYS87 2.2 19.3 1.0
SG R:CYS84 2.3 21.7 1.0
SG R:CYS59 2.3 20.9 1.0
CE1 R:HIS68 2.9 17.2 1.0
CD2 R:HIS68 3.1 17.2 1.0
CB R:CYS84 3.3 21.7 1.0
CB R:CYS87 3.3 19.3 1.0
CB R:CYS59 3.4 20.9 1.0
N R:CYS87 3.8 19.3 1.0
ND1 R:HIS68 4.1 17.2 1.0
CA R:CYS87 4.2 19.3 1.0
CG R:HIS68 4.2 17.2 1.0
CB R:TYR86 4.3 16.3 1.0
C R:CYS59 4.3 20.9 1.0
N R:GLY61 4.4 18.4 1.0
N R:ASP60 4.5 19.1 1.0
CA R:CYS59 4.5 20.9 1.0
O R:CYS59 4.6 20.9 1.0
C R:ASP60 4.7 19.1 1.0
CG2 R:VAL71 4.7 19.8 1.0
CA R:GLY61 4.7 18.4 1.0
CA R:CYS84 4.7 21.7 1.0
C R:TYR86 4.8 16.3 1.0
CA R:ASP60 4.9 19.1 1.0
CA R:TYR86 4.9 16.3 1.0
N R:TYR86 4.9 16.3 1.0

Reference:

Z.Yin, N.Burger, D.Kula-Alwar, D.Aksentijevic, H.R.Bridges, H.Prag, D.Grba, C.Viscomi, A.James, A.Mottahedin, T.Krieg, M.P.Murphy, J.Hirst. Structural Basis For A Complex I Mutation That Blocks Pathological Ros Production To Be Published.
DOI: 10.1038/S41467-021-20942-W
Page generated: Tue Oct 29 16:50:34 2024

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