Zinc in PDB 7afs: The Structure of Artemis Variant D37A

The structure of The Structure of Artemis Variant D37A, PDB code: 7afs was solved by Y.Yosaatmadja, S.Goubin, J.A.Newman, S.M.M.Mukhopadhyay, A.A.Dannerfjord, N.A.Burgess-Brown, F.Von Delft, C.H.Arrowsmith, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.66 / 1.70
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	35.909, 48.062, 48.207, 82.89, 76.43, 86.38
R / Rfree (%)	18.6 / 21.6

The structure of The Structure of Artemis Variant D37A also contains other interesting chemical elements:

Nickel

(Ni)

1 atom

The binding sites of Zinc atom in the The Structure of Artemis Variant D37A (pdb code 7afs). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Structure of Artemis Variant D37A, PDB code: 7afs:

Zinc binding site 1 out of 1 in the The Structure of Artemis Variant D37A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Structure of Artemis Variant D37A within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn402 b:20.4 occ:1.00 ND1 A:HIS254 2.2 20.2 1.0 ND1 A:HIS228 2.2 24.4 1.0 SG A:CYS256 2.3 21.2 1.0 SG A:CYS272 2.3 20.9 1.0 CE1 A:HIS228 3.0 25.9 1.0 CE1 A:HIS254 3.0 20.6 1.0 CB A:CYS272 3.1 22.5 1.0 CG A:HIS254 3.2 19.5 1.0 CG A:HIS228 3.2 24.8 1.0 CB A:CYS256 3.3 21.4 1.0 CB A:HIS254 3.6 18.8 1.0 CB A:HIS228 3.7 23.8 1.0 NE2 A:HIS228 4.2 25.3 1.0 N A:CYS272 4.2 24.1 1.0 NE2 A:HIS254 4.2 20.7 1.0 CA A:CYS272 4.3 23.1 1.0 CD2 A:HIS228 4.3 26.4 1.0 CD2 A:HIS254 4.3 20.1 1.0 CA A:CYS256 4.6 22.0 1.0 N A:CYS256 4.6 21.8 1.0 CA A:HIS254 4.6 18.9 1.0 CB A:LEU270 4.7 25.1 0.5 CD1 A:LEU270 4.8 24.5 0.5 CD2 A:LEU270 5.0 29.4 0.5

Y.Yosaatmadja, S.Goubin, J.A.Newman, S.M.M.Mukhopadhyay, A.A.Dannerfjord, N.A.Burgess-Brown, F.Von Delft, C.H.Arrowsmith, C.Bountra, O.Gileadi. The Structure of Artemis/SNM1C/DCLRE1C with 2 Zinc Ions To Be Published.