Zinc in PDB 7a94: Sars-Cov-2 Spike Glycoprotein with 1 ACE2 Bound

All present enzymatic activity of Sars-Cov-2 Spike Glycoprotein with 1 ACE2 Bound:
3.4.17.23;

The binding sites of Zinc atom in the Sars-Cov-2 Spike Glycoprotein with 1 ACE2 Bound (pdb code 7a94). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Sars-Cov-2 Spike Glycoprotein with 1 ACE2 Bound, PDB code: 7a94:

Zinc binding site 1 out of 1 in the Sars-Cov-2 Spike Glycoprotein with 1 ACE2 Bound


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Sars-Cov-2 Spike Glycoprotein with 1 ACE2 Bound within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn901 b:0.6 occ:1.01 NE2 D:HIS378 2.3 0.1 1.0 OE2 D:GLU402 2.3 0.1 1.0 CE1 D:HIS374 2.6 0.5 1.0 NE2 D:HIS374 2.7 0.5 1.0 CE1 D:HIS378 2.8 0.1 1.0 CD D:GLU402 3.5 0.1 1.0 O D:GLU402 3.5 0.1 1.0 CA D:GLU402 3.5 0.1 1.0 CD2 D:HIS378 3.6 0.1 1.0 ND1 D:HIS374 3.7 0.5 1.0 CB D:GLU402 3.9 0.1 1.0 CD2 D:HIS374 3.9 0.5 1.0 C D:GLU402 4.0 0.1 1.0 ND1 D:HIS378 4.1 0.1 1.0 CA D:GLY405 4.1 0.1 1.0 CG D:GLU402 4.3 0.1 1.0 OE1 D:GLU402 4.4 0.1 1.0 CG D:HIS374 4.4 0.5 1.0 O D:HIS401 4.5 0.4 1.0 CG D:HIS378 4.5 0.1 1.0 C D:GLY405 4.6 0.1 1.0 N D:GLU406 4.6 0.7 1.0 N D:GLU402 4.7 0.1 1.0 N D:GLY405 4.7 0.1 1.0 C D:HIS401 5.0 0.4 1.0

D.J.Benton, A.G.Wrobel, P.Xu, C.Roustan, S.R.Martin, P.B.Rosenthal, J.J.Skehel, S.J.Gamblin. Receptor Binding and Priming of the Spike Protein of Sars-Cov-2 For Membrane Fusion. Nature 2020.
ISSN: ESSN 1476-4687
PubMed: 32942285
DOI: 10.1038/S41586-020-2772-0