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Zinc in PDB, part 200 (files: 7961-8000), PDB 4dqy-4dyk

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 7961-8000 (PDB 4dqy-4dyk).
  1. 4dqy (Zn: 4) - Structure of Human Parp-1 Bound to A Dna Double Strand Break
  2. 4dr1 (Zn: 2) - Crystal Structure of the Apo 30S Ribosomal Subunit From Thermus Thermophilus (HB8)
    Other atoms: Mg (254);
  3. 4dr2 (Zn: 2) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Multiple Copies of Paromomycin Molecules Bound
    Other atoms: Mg (327);
  4. 4dr3 (Zn: 2) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Streptomycin Bound
    Other atoms: Mg (264);
  5. 4dr4 (Zn: 2) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Codon, Cognate Transfer Rna Anticodon Stem-Loop and Multiple Copies of Paromomycin Molecules Bound
    Other atoms: Mg (363);
  6. 4dr5 (Zn: 2) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Codon, Crystallographically Disordered Cognate Transfer Rna Anticodon Stem-Loop and Streptomycin Bound
    Other atoms: Mg (272);
  7. 4dr6 (Zn: 2) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Codon, Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched at the First Codon Position and Streptomycin Bound
    Other atoms: Mg (377);
  8. 4dr7 (Zn: 2) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Codon, Crystallographically Disordered Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched at the Second Codon Position, and Streptomycin Bound
    Other atoms: Mg (344);
  9. 4dr8 (Zn: 4) - Crystal Structure of A Peptide Deformylase From Synechococcus Elongatus
    Other atoms: Cl (1);
  10. 4dr9 (Zn: 4) - Crystal Structure of A Peptide Deformylase From Synechococcus Elongatus in Complex with Actinonin
    Other atoms: Br (5);
  11. 4dsy (Zn: 4) - Crystal Structure of Red Kidney Bean Purple Acid Phosphatase in Complex with Maybridge Fragment CC24201
    Other atoms: Fe (4);
  12. 4dt2 (Zn: 4) - Crystal Structure of Red Kidney Bean Purple Acid Phosphatase in Complex with Maybridge Fragment CC27209
    Other atoms: Fe (4);
  13. 4dt3 (Zn: 3) - Crystal Structure of Zinc-Charged Lysozyme
    Other atoms: Cl (1);
  14. 4dtt (Zn: 2) - Crystal Structure of Human Insulin Degrading Enzyme (Ide) in Complex with Compund 41367
  15. 4duk (Zn: 1) - Carboxypeptidase T with L-Benzylsuccinic Acid
    Other atoms: Ca (4);
  16. 4duy (Zn: 2) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, U13C
    Other atoms: Mg (312);
  17. 4duz (Zn: 2) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, U13C, Bound with Streptomycin
    Other atoms: Mg (267);
  18. 4dv0 (Zn: 2) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, U20G
    Other atoms: Mg (277);
  19. 4dv1 (Zn: 2) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, U20G, Bound with Streptomycin
    Other atoms: Mg (247);
  20. 4dv2 (Zn: 2) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, C912A
    Other atoms: Mg (289);
  21. 4dv3 (Zn: 2) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, C912A, Bound with Streptomycin
    Other atoms: Mg (281);
  22. 4dv4 (Zn: 2) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, A914G
    Other atoms: Mg (287);
  23. 4dv5 (Zn: 2) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, A914G, Bound with Streptomycin
    Other atoms: Mg (273);
  24. 4dv6 (Zn: 2) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, A915G
    Other atoms: Mg (320);
  25. 4dv7 (Zn: 2) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, A915G, Bound with Streptomycin
    Other atoms: Mg (292);
  26. 4dv8 (Zn: 1) - Anthrax Lethal Factor Metalloproteinase in Complex with the Hydroxamic Acid Based Small Molecule PT8421
    Other atoms: F (2);
  27. 4dvi (Zn: 2) - Crystal Structure of Tankyrase 1 with IWR2
  28. 4dwc (Zn: 2) - Crystal Structure of the Glycoprotein Erns From the Pestivirus Bvdv-1 in Complex with Zn Ions
  29. 4dwk (Zn: 2) - Structure of Cystein Free Insulin Degrading Enzyme with Compound BDM41671 ((S)-2-{2-[Carboxymethyl-(3-Phenyl-Propyl)-Amino]- Acetylamino}-3-(1H-Imidazol-4-Yl)-Propionic Acid Methyl Ester)
  30. 4dwv (Zn: 4) - Horse Alcohol Dehydrogenase Complexed with Nad+ and 2,3,4,5,6- Pentafluorobenzyl Alcohol
    Other atoms: F (10);
  31. 4dwx (Zn: 5) - Crystal Structure of A Family Gh-19 Chitinase From Rye Seeds
  32. 4dwz (Zn: 38) - Crystal Structure of TON_0340
  33. 4dxb (Zn: 4) - 2.29A Structure of the Engineered Mbp Tem-1 Fusion Protein RG13 in Complex with Zinc, P1 Space Group
  34. 4dxc (Zn: 2) - Crystal Structure of the Engineered Mbp Tem-1 Fusion Protein RG13, C2 Space Group
  35. 4dxh (Zn: 4) - Horse Liver Alcohol Dehydrogenase Complexed with Nad+ and 2,2,2- Trifluoroethanol
    Other atoms: F (6);
  36. 4dxu (Zn: 2) - Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Aminocaproic Acid at 1.46 A Resolution
    Other atoms: Fe (1);
  37. 4dxx (Zn: 1) - Tgt K52M Mutant Crystallized at pH 8.5
  38. 4dy1 (Zn: 2) - Trna-Guanine Transglycosylase F92C C158S C281S Mutant
    Other atoms: Cl (1);
  39. 4dyg (Zn: 5) - Crystal Structure of A Family Gh-19 Chitinase From Rye Seeds in Complex with (Glcnac)4
  40. 4dyk (Zn: 2) - Crystal Structure of An Adenosine Deaminase From Pseudomonas Aeruginosa PAO1 (Target Nysgrc-200449) with Bound Zn
    Other atoms: Mg (2);
Page generated: Mon Jan 25 16:23:59 2021

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