Atomistry » Zinc » PDB 6yhq-6yo7 » 6yhq
Atomistry »
  Zinc »
    PDB 6yhq-6yo7 »
      6yhq »

Zinc in PDB 6yhq: Crystal Structure of Fab F5.18.6, Anti-Plasmodium Vivax AMA1

Protein crystallography data

The structure of Crystal Structure of Fab F5.18.6, Anti-Plasmodium Vivax AMA1, PDB code: 6yhq was solved by G.A.Bentley, F.A.Saul, B.Vulliez-Le Normand, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.00 / 1.89
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 95.08, 114.99, 40.68, 90, 90, 90
R / Rfree (%) 18.5 / 23.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Fab F5.18.6, Anti-Plasmodium Vivax AMA1 (pdb code 6yhq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Fab F5.18.6, Anti-Plasmodium Vivax AMA1, PDB code: 6yhq:

Zinc binding site 1 out of 1 in 6yhq

Go back to Zinc Binding Sites List in 6yhq
Zinc binding site 1 out of 1 in the Crystal Structure of Fab F5.18.6, Anti-Plasmodium Vivax AMA1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Fab F5.18.6, Anti-Plasmodium Vivax AMA1 within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Zn301

b:38.5
occ:1.00
N L:SCN302 1.9 38.5 1.0
NE2 L:HIS189 2.1 26.0 1.0
OE1 L:GLU185 2.3 34.0 1.0
OE2 L:GLU185 2.7 38.4 1.0
CD L:GLU185 2.8 34.1 1.0
C L:SCN302 3.0 38.6 1.0
CD2 L:HIS189 3.0 24.8 1.0
CE1 L:HIS189 3.1 26.4 1.0
NH2 L:ARG155 3.7 32.7 1.0
CG L:HIS189 4.2 23.5 1.0
ND1 L:HIS189 4.2 26.0 1.0
CG L:GLU185 4.3 27.2 1.0
O L:HOH465 4.4 25.3 1.0
O L:GLU185 4.4 22.7 1.0
CB L:LYS188 4.5 22.5 1.0
CZ L:ARG155 4.6 32.6 1.0
CD L:LYS188 4.7 31.6 1.0
NH1 L:ARG155 4.7 32.3 1.0
S L:SCN302 4.8 38.3 1.0

Reference:

G.A.Bentley, F.A.Saul, B.Vulliez-Le Normand. Crystal Structure of Fab F5.18.6, Anti-Plasmodium Vivax AMA1 To Be Published.
Page generated: Thu Aug 21 21:28:27 2025

Last articles

Zn in 7G68
Zn in 7G69
Zn in 7G67
Zn in 7G65
Zn in 7G66
Zn in 7G64
Zn in 7G63
Zn in 7G60
Zn in 7G61
Zn in 7G5Z
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy