Zinc in PDB 6wrh: The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant

Enzymatic activity of The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant

All present enzymatic activity of The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant:
2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13;

Protein crystallography data

The structure of The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant, PDB code: 6wrh was solved by J.Osipiuk, C.Tesar, R.Jedrzejczak, M.Endres, L.Welk, G.Babnigg, Y.Kim, K.Michalska, A.Joachimiak, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.99 / 1.60
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 82.403, 82.403, 134.503, 90.00, 90.00, 120.00
R / Rfree (%) 12.3 / 16.4

Other elements in 6wrh:

The structure of The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant (pdb code 6wrh). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant, PDB code: 6wrh:

Zinc binding site 1 out of 1 in 6wrh

Go back to Zinc Binding Sites List in 6wrh
Zinc binding site 1 out of 1 in the The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn501

b:29.1
occ:0.95
 SG A:CYS226 2.3 29.5 1.0
SG A:CYS189 2.3 27.8 1.0
SG A:CYS224 2.3 29.4 1.0
SG A:CYS192 2.3 33.9 1.0
CB A:CYS226 3.2 30.4 1.0
CB A:CYS224 3.2 30.2 1.0
CB A:CYS189 3.3 28.8 1.0
CB A:CYS192 3.3 37.0 1.0
N A:CYS192 3.8 31.9 1.0
N A:CYS226 4.1 32.6 1.0
CA A:CYS192 4.2 33.9 1.0
CA A:CYS226 4.2 30.2 1.0
CB A:THR191 4.2 29.8 1.0
CB A:LYS228 4.5 37.3 1.0
CA A:CYS224 4.6 30.1 1.0
O A:HOH969 4.6 38.1 1.0
CA A:CYS189 4.7 29.4 1.0
CG2 A:THR191 4.7 34.2 1.0
C A:THR191 4.7 30.6 1.0
CA A:THR191 4.9 30.1 1.0
CG A:LYS228 4.9 40.8 1.0
C A:CYS224 4.9 30.9 1.0
N A:THR191 4.9 27.4 1.0
C A:CYS226 5.0 31.4 1.0

Reference:

J.Osipiuk, C.Tesar, R.Jedrzejczak, M.Endres, L.Welk, G.Babnigg, Y.Kim, K.Michalska, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant To Be Published.
Page generated: Wed Dec 16 13:06:24 2020

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