Zinc in PDB 6vjs: Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex
Enzymatic activity of Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex
All present enzymatic activity of Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex:
2.7.7.6;
2.7.7.6;
Protein crystallography data
The structure of Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex, PDB code: 6vjs
was solved by
K.S.Murakami,
V.Molodtsov,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 50.09 / 4.02 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 187.077, 205.501, 309.880, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 23 / 27.6 |
Other elements in 6vjs:
The structure of Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex also contains other interesting chemical elements:
| Magnesium | (Mg) | 2 atoms |
Zinc Binding Sites:
The binding sites of Zinc atom in the Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex
(pdb code 6vjs). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex, PDB code: 6vjs:
Jump to Zinc binding site number: 1; 2; 3; 4;
In total 4 binding sites of Zinc where determined in the Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex, PDB code: 6vjs:
Jump to Zinc binding site number: 1; 2; 3; 4;
Zinc binding site 1 out of 4 in 6vjs
Go back to
Zinc Binding Sites List in 6vjs
Zinc binding site 1 out
of 4 in the Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex within 5.0Å range:
|
Zinc binding site 2 out of 4 in 6vjs
Go back to
Zinc Binding Sites List in 6vjs
Zinc binding site 2 out
of 4 in the Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex within 5.0Å range:
|
Zinc binding site 3 out of 4 in 6vjs
Go back to
Zinc Binding Sites List in 6vjs
Zinc binding site 3 out
of 4 in the Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex within 5.0Å range:
|
Zinc binding site 4 out of 4 in 6vjs
Go back to
Zinc Binding Sites List in 6vjs
Zinc binding site 4 out
of 4 in the Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Escherichia Coli Rna Polymerase and Ureidothiophene-2-Carboxylic Acid Complex within 5.0Å range:
|
Reference:
J.Haupenthal,
Y.Kautz,
W.A.M.Elgaher,
L.Patzold,
T.Rohrig,
M.W.Laschke,
T.Tschernig,
A.K.H.Hirsch,
V.Molodtsov,
K.S.Murakami,
R.W.Hartmann,
M.Bischoff.
Evaluation of Bacterial Rna Polymerase Inhibitors in A Staphylococcus Aureus -Based Wound Infection Model in SKH1 Mice. Acs Infect Dis. V. 6 2573 2020.
ISSN: ESSN 2373-8227
PubMed: 32886885
DOI: 10.1021/ACSINFECDIS.0C00034
Page generated: Wed Dec 16 13:01:54 2020
ISSN: ESSN 2373-8227
PubMed: 32886885
DOI: 10.1021/ACSINFECDIS.0C00034
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