Zinc in PDB 6u4m: Solution Structure of Paxillin LIM4

The binding sites of Zinc atom in the Solution Structure of Paxillin LIM4 (pdb code 6u4m). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of Paxillin LIM4, PDB code: 6u4m:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of Paxillin LIM4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Paxillin LIM4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn701 b:0.0 occ:1.00 ND1 A:HIS569 2.0 0.0 1.0 ND1 A:HIS572 2.0 0.0 1.0 SG A:CYS552 2.3 0.0 1.0 SG A:CYS549 2.3 0.0 1.0 HB2 A:CYS552 2.5 0.0 1.0 HB2 A:HIS569 2.7 0.0 1.0 HB3 A:CYS549 2.8 0.0 1.0 CB A:CYS552 2.9 0.0 1.0 CE1 A:HIS572 3.0 0.0 1.0 CE1 A:HIS569 3.0 0.0 1.0 CB A:CYS549 3.0 0.0 1.0 CG A:HIS569 3.0 0.0 1.0 CG A:HIS572 3.1 0.0 1.0 HB2 A:HIS572 3.1 0.0 1.0 HE1 A:HIS572 3.2 0.0 1.0 HE1 A:HIS569 3.2 0.0 1.0 H A:HIS569 3.3 0.0 1.0 HB2 A:CYS549 3.3 0.0 1.0 CB A:HIS569 3.4 0.0 1.0 CB A:HIS572 3.4 0.0 1.0 HB3 A:CYS552 3.5 0.0 1.0 HB3 A:HIS572 3.6 0.0 1.0 N A:HIS569 4.1 0.0 1.0 CA A:CYS552 4.1 0.0 1.0 H A:CYS552 4.1 0.0 1.0 HB3 A:HIS569 4.1 0.0 1.0 CD2 A:HIS569 4.1 0.0 1.0 NE2 A:HIS572 4.2 0.0 1.0 NE2 A:HIS569 4.2 0.0 1.0 CD2 A:HIS572 4.2 0.0 1.0 N A:CYS552 4.2 0.0 1.0 CA A:HIS569 4.3 0.0 1.0 CA A:CYS549 4.4 0.0 1.0 O A:CYS549 4.5 0.0 1.0 HA A:CYS552 4.5 0.0 1.0 C A:CYS549 4.7 0.0 1.0 HA A:PHE568 4.9 0.0 1.0 CA A:HIS572 4.9 0.0 1.0 H A:CYS549 4.9 0.0 1.0 HA A:HIS569 4.9 0.0 1.0 HG12 A:ILE556 4.9 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of Paxillin LIM4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of Paxillin LIM4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn702 b:0.0 occ:1.00 SG A:CYS596 2.3 0.0 1.0 SG A:CYS575 2.3 0.0 1.0 SG A:CYS578 2.3 0.0 1.0 SG A:CYS599 2.3 0.0 1.0 HB3 A:CYS575 2.6 0.0 1.0 CB A:CYS575 2.6 0.0 1.0 HB2 A:CYS575 2.6 0.0 1.0 H A:CYS596 2.7 0.0 1.0 H A:CYS578 3.1 0.0 1.0 HB2 A:CYS599 3.1 0.0 1.0 CB A:CYS599 3.3 0.0 1.0 HB3 A:PHE577 3.3 0.0 1.0 N A:CYS596 3.6 0.0 1.0 HB3 A:CYS599 3.6 0.0 1.0 CB A:CYS596 3.7 0.0 1.0 HD3 A:LYS580 3.8 0.0 1.0 HB2 A:CYS596 3.8 0.0 1.0 CB A:CYS578 3.8 0.0 1.0 HA A:TYR595 3.9 0.0 1.0 N A:CYS578 3.9 0.0 1.0 HB3 A:CYS578 4.0 0.0 1.0 CA A:CYS575 4.1 0.0 1.0 CB A:PHE577 4.2 0.0 1.0 HG2 A:LYS580 4.3 0.0 1.0 HD12 A:LEU582 4.3 0.0 1.0 HD1 A:TYR595 4.3 0.0 1.0 CA A:CYS596 4.3 0.0 1.0 H A:LEU579 4.3 0.0 1.0 HB2 A:PHE577 4.3 0.0 1.0 HD13 A:LEU582 4.4 0.0 1.0 H A:PHE577 4.5 0.0 1.0 CA A:CYS578 4.5 0.0 1.0 HB3 A:CYS596 4.5 0.0 1.0 HD1 A:PHE577 4.6 0.0 1.0 H A:CYS599 4.6 0.0 1.0 CA A:CYS599 4.6 0.0 1.0 HA A:CYS575 4.6 0.0 1.0 HB2 A:CYS578 4.6 0.0 1.0 C A:TYR595 4.6 0.0 1.0 CA A:TYR595 4.7 0.0 1.0 CD A:LYS580 4.7 0.0 1.0 C A:CYS575 4.7 0.0 1.0 H A:CYS575 4.8 0.0 1.0 HE3 A:LYS580 4.8 0.0 1.0 CD1 A:LEU582 4.8 0.0 1.0 HA A:CYS599 4.9 0.0 1.0 H A:LYS580 4.9 0.0 1.0 C A:PHE577 4.9 0.0 1.0 O A:CYS575 5.0 0.0 1.0 N A:PHE577 5.0 0.0 1.0 N A:CYS575 5.0 0.0 1.0 N A:CYS599 5.0 0.0 1.0 CA A:PHE577 5.0 0.0 1.0 N A:LEU579 5.0 0.0 1.0

L.Zhu, H.Liu, F.Lu, J.Yang, T.V.Byzova, J.Qin. Structural Basis of Paxillin Recruitment By Kindlin-2 in Regulating Cell Adhesion. Structure V. 27 1686 2019.
ISSN: ISSN 0969-2126
PubMed: 31590942
DOI: 10.1016/J.STR.2019.09.006