Zinc in PDB 6t1h: Oxa-51-Like Beta-Lactamase Oxa-66

Protein crystallography data

The structure of Oxa-51-Like Beta-Lactamase Oxa-66, PDB code: 6t1h was solved by Y.Takebayashi, D.Chirgadze, S.Henderson, P.J.Warburton, B.E.Evans, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.77 / 2.10
Space group P 43 2 2
Cell size a, b, c (Å), α, β, γ (°) 87.544, 87.544, 90.124, 90.00, 90.00, 90.00
R / Rfree (%) 18.8 / 22.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Oxa-51-Like Beta-Lactamase Oxa-66 (pdb code 6t1h). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Oxa-51-Like Beta-Lactamase Oxa-66, PDB code: 6t1h:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6t1h

Go back to Zinc Binding Sites List in 6t1h
Zinc binding site 1 out of 2 in the Oxa-51-Like Beta-Lactamase Oxa-66


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Oxa-51-Like Beta-Lactamase Oxa-66 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:27.6
occ:1.00
O A:HOH593 2.1 11.0 1.0
ND1 A:HIS93 2.2 20.6 1.0
O A:HOH588 2.4 26.9 1.0
CG A:HIS93 3.1 18.7 1.0
CE1 A:HIS93 3.3 24.1 1.0
CB A:HIS93 3.3 17.6 1.0
CA A:HIS93 3.8 22.0 1.0
CD2 A:HIS93 4.3 20.0 1.0
NE2 A:HIS93 4.4 23.1 1.0
O A:HIS93 4.4 18.9 1.0
C A:HIS93 4.6 17.7 1.0
N A:HIS93 4.9 19.8 1.0

Zinc binding site 2 out of 2 in 6t1h

Go back to Zinc Binding Sites List in 6t1h
Zinc binding site 2 out of 2 in the Oxa-51-Like Beta-Lactamase Oxa-66


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Oxa-51-Like Beta-Lactamase Oxa-66 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn302

b:42.2
occ:1.00
NE2 A:HIS49 2.1 35.4 1.0
O A:HOH536 2.2 41.1 1.0
CE1 A:HIS49 3.1 33.8 1.0
CD2 A:HIS49 3.1 30.7 1.0
O A:GLU47 4.0 32.5 1.0
ND1 A:HIS49 4.2 33.5 1.0
CG A:HIS49 4.2 32.8 1.0
C A:GLU47 5.0 31.1 1.0

Reference:

Y.Takebayashi, D.Chirgadze, S.Henderson, P.Warburton, P.J.Warburton, B.E.Evans. Structure of the Oxa-51-Like Beta-Lactamase Oxa-66 To Be Published.
Page generated: Wed Dec 16 12:50:51 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy