Zinc in PDB 6sn6: Carboxypeptidase T with N-Sulfamoyl-L-Glutamic Acid

Enzymatic activity of Carboxypeptidase T with N-Sulfamoyl-L-Glutamic Acid

All present enzymatic activity of Carboxypeptidase T with N-Sulfamoyl-L-Glutamic Acid:
3.4.17.18;

Protein crystallography data

The structure of Carboxypeptidase T with N-Sulfamoyl-L-Glutamic Acid, PDB code: 6sn6 was solved by V.I.Timofeev, V.K.Akparov, I.P.Kuranova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.93 / 1.93
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 158.730, 158.730, 105.670, 90.00, 90.00, 120.00
R / Rfree (%) 11.2 / 14.5

Other elements in 6sn6:

The structure of Carboxypeptidase T with N-Sulfamoyl-L-Glutamic Acid also contains other interesting chemical elements:

Calcium (Ca) 3 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Carboxypeptidase T with N-Sulfamoyl-L-Glutamic Acid (pdb code 6sn6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Carboxypeptidase T with N-Sulfamoyl-L-Glutamic Acid, PDB code: 6sn6:

Zinc binding site 1 out of 1 in 6sn6

Go back to Zinc Binding Sites List in 6sn6
Zinc binding site 1 out of 1 in the Carboxypeptidase T with N-Sulfamoyl-L-Glutamic Acid


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Carboxypeptidase T with N-Sulfamoyl-L-Glutamic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:13.4
occ:1.00
ND1 A:HIS204 2.1 11.3 1.0
NAA A:3K0402 2.1 17.1 1.0
ND1 A:HIS69 2.1 13.4 1.0
OE1 A:GLU72 2.2 12.8 1.0
OE2 A:GLU72 2.4 13.4 1.0
CD A:GLU72 2.6 12.7 1.0
CE1 A:HIS69 3.0 13.8 1.0
CE1 A:HIS204 3.0 12.8 1.0
CG A:HIS204 3.1 12.2 1.0
CG A:HIS69 3.2 12.6 1.0
SAN A:3K0402 3.2 30.0 1.0
OAE A:3K0402 3.2 27.8 1.0
CB A:HIS204 3.5 12.0 1.0
CB A:HIS69 3.6 11.9 1.0
O A:THR205 3.9 12.8 1.0
O A:HOH688 4.0 15.9 1.0
CG A:GLU72 4.1 12.1 1.0
N A:3K0402 4.2 24.1 1.0
NE2 A:HIS69 4.2 12.7 1.0
OAD A:3K0402 4.2 30.6 1.0
NE2 A:HIS204 4.2 10.5 1.0
CD2 A:HIS204 4.2 12.4 1.0
O A:HOH521 4.3 23.0 1.0
CD2 A:HIS69 4.3 14.1 1.0
CA A:HIS204 4.3 11.8 1.0
CA A:3K0402 4.3 20.1 1.0
N A:THR205 4.5 12.1 1.0
NH1 A:ARG129 4.5 14.7 1.0
OXT A:3K0402 4.6 17.6 1.0
C A:3K0402 4.7 18.7 1.0
OE1 A:GLU277 4.7 23.0 1.0
CA A:HIS69 4.8 11.8 1.0
N A:HIS69 4.9 10.8 1.0
CB A:GLU72 5.0 11.9 1.0
C A:THR205 5.0 12.2 1.0
C A:HIS204 5.0 11.1 1.0

Reference:

V.I.Timofeev, V.K.Akparov, I.P.Kuranova. Carboxypeptidase T with N-Sulfamoyl-L-Glutamic Acid To Be Published.
Page generated: Wed Dec 16 12:49:07 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy