Zinc in PDB 6rui: Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2

All present enzymatic activity of Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2:
2.7.7.6;

The binding sites of Zinc atom in the Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2 (pdb code 6rui). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2, PDB code: 6rui:

Zinc binding site 1 out of 1 in the Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Rna Polymerase I Pre-Initiation Complex Dna Opening Intermediate 2 within 5.0Å range: probe atom residue distance (Å) B Occ Q:Zn601 b:0.0 occ:1.00 OG1 Q:THR12 2.1 0.4 1.0 CD2 Q:HIS33 2.4 84.3 1.0 SG Q:CYS29 2.5 96.3 1.0 CB Q:THR12 2.6 0.4 1.0 CG Q:HIS33 3.3 84.3 1.0 O Q:THR12 3.3 0.4 1.0 CB Q:CYS29 3.3 96.3 1.0 CG2 Q:THR12 3.5 0.4 1.0 NE2 Q:HIS33 3.5 84.3 1.0 CB Q:HIS33 3.6 84.3 1.0 CA Q:THR12 3.8 0.4 1.0 C Q:THR12 4.0 0.4 1.0 CB Q:TYR31 4.3 95.7 1.0 ND1 Q:HIS33 4.5 84.3 1.0 N Q:HIS33 4.5 84.3 1.0 CE1 Q:HIS33 4.6 84.3 1.0 N Q:TYR31 4.6 95.7 1.0 CA Q:HIS33 4.6 84.3 1.0 O Q:GLY11 4.7 0.9 1.0 CA Q:CYS29 4.8 96.3 1.0 CA Q:TYR31 4.9 95.7 1.0 N Q:THR12 4.9 0.4 1.0 CD2 Q:TYR31 4.9 95.7 1.0 CG Q:TYR31 5.0 95.7 1.0

Y.Sadian, F.Baudin, L.Tafur, B.Murciano, R.Wetzel, F.Weis, C.W.Muller. Molecular Insight Into Rna Polymerase I Promoter Recognition and Promoter Melting. Nat Commun V. 10 5543 2019.
ISSN: ESSN 2041-1723
PubMed: 31804486
DOI: 10.1038/S41467-019-13510-W