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Zinc in PDB 6rr9: Dna/Rna Binding Protein

Protein crystallography data

The structure of Dna/Rna Binding Protein, PDB code: 6rr9 was solved by E.Huber, K.Lammens, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.78 / 3.43
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 101.060, 101.060, 114.460, 90.00, 90.00, 120.00
R / Rfree (%) 20.5 / 25.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Dna/Rna Binding Protein (pdb code 6rr9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Dna/Rna Binding Protein, PDB code: 6rr9:

Zinc binding site 1 out of 1 in 6rr9

Go back to Zinc Binding Sites List in 6rr9
Zinc binding site 1 out of 1 in the Dna/Rna Binding Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Dna/Rna Binding Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:55.6
occ:1.00
SG A:CYS303 1.8 52.0 1.0
ND1 A:HIS266 2.3 57.2 1.0
SG A:CYS302 2.6 54.7 1.0
SG A:CYS268 2.6 78.9 1.0
CE1 A:HIS266 2.9 59.1 1.0
CB A:CYS302 3.2 51.6 1.0
CB A:CYS303 3.5 52.5 1.0
CG A:HIS266 3.5 58.6 1.0
N A:CYS303 3.6 48.1 1.0
CB A:CYS268 3.7 79.0 1.0
CB A:HIS266 4.0 56.6 1.0
C A:CYS302 4.0 45.3 1.0
N A:CYS268 4.1 72.9 1.0
CD A:PRO272 4.1 58.8 1.0
NE2 A:HIS266 4.2 61.8 1.0
CA A:CYS302 4.2 47.4 1.0
CA A:CYS303 4.2 52.0 1.0
CA A:HIS266 4.3 56.3 1.0
N A:PHE267 4.4 63.5 1.0
CD2 A:HIS266 4.5 64.5 1.0
CA A:CYS268 4.5 79.3 1.0
N A:ARG271 4.6 77.7 1.0
CA A:ARG271 4.6 72.1 1.0
C A:HIS266 4.9 63.3 1.0
O A:CYS302 5.0 49.6 1.0
C A:CYS268 5.0 86.9 1.0

Reference:

E.Huber, F.Metzner, K.-P.Hopfner, K.Lammens. Structure of Schlafen 5 N-Terminal Domain To Be Published.
Page generated: Tue Oct 29 06:43:48 2024

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