Zinc in PDB 6rr9: Dna/Rna Binding Protein

Protein crystallography data

The structure of Dna/Rna Binding Protein, PDB code: 6rr9 was solved by E.Huber, K.Lammens, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.78 / 3.43
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 101.060, 101.060, 114.460, 90.00, 90.00, 120.00
R / Rfree (%) 20.5 / 25.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Dna/Rna Binding Protein (pdb code 6rr9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Dna/Rna Binding Protein, PDB code: 6rr9:

Zinc binding site 1 out of 1 in 6rr9

Go back to Zinc Binding Sites List in 6rr9
Zinc binding site 1 out of 1 in the Dna/Rna Binding Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Dna/Rna Binding Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:55.6
occ:1.00
SG A:CYS303 1.8 52.0 1.0
ND1 A:HIS266 2.3 57.2 1.0
SG A:CYS302 2.6 54.7 1.0
SG A:CYS268 2.6 78.9 1.0
CE1 A:HIS266 2.9 59.1 1.0
CB A:CYS302 3.2 51.6 1.0
CB A:CYS303 3.5 52.5 1.0
CG A:HIS266 3.5 58.6 1.0
N A:CYS303 3.6 48.1 1.0
CB A:CYS268 3.7 79.0 1.0
CB A:HIS266 4.0 56.6 1.0
C A:CYS302 4.0 45.3 1.0
N A:CYS268 4.1 72.9 1.0
CD A:PRO272 4.1 58.8 1.0
NE2 A:HIS266 4.2 61.8 1.0
CA A:CYS302 4.2 47.4 1.0
CA A:CYS303 4.2 52.0 1.0
CA A:HIS266 4.3 56.3 1.0
N A:PHE267 4.4 63.5 1.0
CD2 A:HIS266 4.5 64.5 1.0
CA A:CYS268 4.5 79.3 1.0
N A:ARG271 4.6 77.7 1.0
CA A:ARG271 4.6 72.1 1.0
C A:HIS266 4.9 63.3 1.0
O A:CYS302 5.0 49.6 1.0
C A:CYS268 5.0 86.9 1.0

Reference:

E.Huber, F.Metzner, K.-P.Hopfner, K.Lammens. Structure of Schlafen 5 N-Terminal Domain To Be Published.
Page generated: Wed Dec 16 12:41:32 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy