Zinc in PDB 6pv3: Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Altered Helix, Loop, Turn, and Sheet

The binding sites of Zinc atom in the Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Altered Helix, Loop, Turn, and Sheet (pdb code 6pv3). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Altered Helix, Loop, Turn, and Sheet, PDB code: 6pv3:

Zinc binding site 1 out of 1 in the Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Altered Helix, Loop, Turn, and Sheet


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Altered Helix, Loop, Turn, and Sheet within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn101 b:0.3 occ:1.00 NE2 A:HIS22 2.0 0.2 1.0 NE2 A:HIS26 2.0 0.2 1.0 SG A:CYS4 2.3 0.4 1.0 SG A:CYS9 2.3 0.4 1.0 CE1 A:HIS22 3.0 0.2 1.0 CE1 A:HIS26 3.0 0.3 1.0 CD2 A:HIS22 3.0 0.2 1.0 CD2 A:HIS26 3.0 0.2 1.0 HE1 A:HIS22 3.2 0.3 1.0 HD2 A:HIS22 3.2 0.2 1.0 HD2 A:HIS26 3.2 0.3 1.0 HE1 A:HIS26 3.2 0.4 1.0 HB3 A:CYS4 3.3 0.5 1.0 HB3 A:CYS9 3.3 0.6 1.0 CB A:CYS9 3.3 0.4 1.0 CB A:CYS4 3.4 0.3 1.0 HB3 A:TRP6 3.4 0.5 1.0 HB2 A:CYS9 3.5 0.4 1.0 HB2 A:CYS4 3.7 0.5 1.0 HB2 A:TRP6 3.9 0.4 1.0 HD2 A:LYS23 4.1 0.8 1.0 ND1 A:HIS22 4.1 0.2 1.0 ND1 A:HIS26 4.1 0.3 1.0 CG A:HIS22 4.1 0.2 1.0 CG A:HIS26 4.1 0.2 1.0 CB A:TRP6 4.2 0.5 1.0 H A:GLY10 4.3 1.0 1.0 HA A:LYS23 4.3 0.2 1.0 HG2 A:LYS11 4.3 0.8 1.0 HB2 A:LYS11 4.4 0.4 1.0 H A:LYS11 4.4 0.5 1.0 H A:TRP6 4.5 0.4 1.0 HG23 A:THR25 4.5 1.7 1.0 HG22 A:THR25 4.6 1.5 1.0 CA A:CYS4 4.7 0.3 1.0 CA A:CYS9 4.8 0.6 1.0 HG3 A:LYS11 4.8 0.7 1.0 HG21 A:THR25 4.8 1.7 1.0 O A:CYS4 4.8 1.7 1.0 CG2 A:THR25 4.9 1.1 1.0 CG A:TRP6 4.9 0.6 1.0 N A:GLY10 4.9 0.5 1.0 CG A:LYS11 5.0 0.4 1.0

S.R.Rao, W.S.Horne. Proteomimetic Zinc Finger Domains with Modified Metal-Binding Beta-Turns Peptide Science 2020.
ISSN: ISSN 1344-7661
DOI: 10.1002/PEP2.24177