Zinc in PDB 6muk: 1.93 Angstrom Resolution Crystal Structure of Peptidase M23 From Neisseria Gonorrhoeae.

Protein crystallography data

The structure of 1.93 Angstrom Resolution Crystal Structure of Peptidase M23 From Neisseria Gonorrhoeae., PDB code: 6muk was solved by G.Minasov, L.Shuvalova, S.Pshenychnyi, K.J.F.Satchell, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.95 / 1.93
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 66.964, 66.964, 181.584, 90.00, 90.00, 90.00
R / Rfree (%) 18.8 / 23.6

Zinc Binding Sites:

The binding sites of Zinc atom in the 1.93 Angstrom Resolution Crystal Structure of Peptidase M23 From Neisseria Gonorrhoeae. (pdb code 6muk). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the 1.93 Angstrom Resolution Crystal Structure of Peptidase M23 From Neisseria Gonorrhoeae., PDB code: 6muk:

Zinc binding site 1 out of 1 in 6muk

Go back to Zinc Binding Sites List in 6muk
Zinc binding site 1 out of 1 in the 1.93 Angstrom Resolution Crystal Structure of Peptidase M23 From Neisseria Gonorrhoeae.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of 1.93 Angstrom Resolution Crystal Structure of Peptidase M23 From Neisseria Gonorrhoeae. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn501

b:52.6
occ:0.50
NE2 A:HIS295 2.2 51.6 1.0
OD1 A:ASP299 2.2 43.5 1.0
ND1 A:HIS375 2.2 30.2 1.0
O A:HOH732 2.2 47.0 1.0
O A:HOH788 2.4 56.9 1.0
CG A:ASP299 2.8 42.4 1.0
OD2 A:ASP299 2.9 47.6 1.0
CD2 A:HIS295 3.0 51.1 1.0
CE1 A:HIS375 3.1 32.7 1.0
CE1 A:HIS295 3.2 50.6 1.0
CG A:HIS375 3.3 31.0 1.0
CB A:HIS375 3.6 31.1 1.0
CG A:HIS295 4.2 49.1 1.0
NE2 A:HIS375 4.2 32.0 1.0
CB A:ASP299 4.3 39.4 1.0
ND1 A:HIS295 4.3 49.8 1.0
NE2 A:HIS373 4.3 45.4 1.0
CD2 A:HIS375 4.3 32.3 1.0
CA A:HIS375 4.5 30.0 1.0
O A:GLY131 4.6 36.6 1.0
NE2 A:HIS343 4.7 34.1 1.0
CD2 A:HIS373 4.8 43.5 1.0
CA A:ASP299 4.8 34.4 1.0
N A:ASP299 4.9 34.5 1.0

Reference:

G.Minasov, L.Shuvalova, S.Pshenychnyi, K.J.F.Satchell, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.93 Angstrom Resolution Crystal Structure of Peptidase M23 From Neisseria Gonorrhoeae. To Be Published.
Page generated: Wed Dec 16 12:20:31 2020

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