Zinc in PDB 6l72: Sirtuin 2 Demyristoylation Native Final Product

Enzymatic activity of Sirtuin 2 Demyristoylation Native Final Product

All present enzymatic activity of Sirtuin 2 Demyristoylation Native Final Product:
2.3.1.286;

Protein crystallography data

The structure of Sirtuin 2 Demyristoylation Native Final Product, PDB code: 6l72 was solved by L.F.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.20 / 2.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 37.736, 77.572, 56.072, 90, 97.35, 90
R / Rfree (%) 17.6 / 24.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Sirtuin 2 Demyristoylation Native Final Product (pdb code 6l72). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Sirtuin 2 Demyristoylation Native Final Product, PDB code: 6l72:

Zinc binding site 1 out of 1 in 6l72

Go back to Zinc Binding Sites List in 6l72
Zinc binding site 1 out of 1 in the Sirtuin 2 Demyristoylation Native Final Product


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Sirtuin 2 Demyristoylation Native Final Product within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn402

b:39.5
occ:1.00
SG A:CYS224 2.3 40.1 1.0
SG A:CYS200 2.3 49.4 1.0
SG A:CYS221 2.3 42.6 1.0
SG A:CYS195 2.4 36.1 1.0
CB A:CYS200 2.8 45.4 1.0
CB A:CYS221 3.1 36.1 1.0
CB A:CYS195 3.2 39.4 1.0
CB A:CYS224 3.7 40.1 1.0
N A:CYS224 3.8 41.8 1.0
O A:CYS200 4.0 62.4 1.0
CA A:CYS200 4.1 49.6 1.0
C A:CYS200 4.2 58.0 1.0
CA A:CYS224 4.2 41.3 1.0
C A:CYS224 4.6 48.2 1.0
O A:CYS224 4.6 54.8 1.0
CA A:CYS221 4.6 35.6 1.0
CB A:ASP223 4.6 41.4 1.0
CA A:CYS195 4.7 41.8 1.0
CB A:SER226 4.7 35.4 1.0
CB A:SER197 4.8 40.4 1.0
CB A:HIS202 4.8 49.2 1.0
N A:HIS202 4.9 45.0 1.0
C A:ASP223 4.9 47.1 1.0
OG A:SER197 4.9 36.4 1.0

Reference:

L.F.Chen, L.F.Chen. N/A N/A.
Page generated: Sat Apr 3 18:24:27 2021

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