Zinc in PDB 6j0d: Crystal Structure of OSSUF4

The structure of Crystal Structure of OSSUF4, PDB code: 6j0d was solved by B.Wang, Q.Luo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	52.34 / 1.90
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	74.024, 74.024, 37.577, 90.00, 90.00, 90.00
R / Rfree (%)	19.6 / 23

The binding sites of Zinc atom in the Crystal Structure of OSSUF4 (pdb code 6j0d). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of OSSUF4, PDB code: 6j0d:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of OSSUF4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of OSSUF4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn101 b:17.0 occ:1.00 NE2 A:HIS53 2.1 14.6 1.0 NE2 A:HIS58 2.2 22.2 1.0 SG A:CYS37 2.3 14.2 1.0 SG A:CYS40 2.3 15.9 1.0 CD2 A:HIS53 2.9 14.6 1.0 CD2 A:HIS58 3.0 15.8 1.0 CB A:CYS37 3.2 13.3 1.0 CE1 A:HIS53 3.2 15.2 1.0 CB A:CYS40 3.3 17.8 1.0 CE1 A:HIS58 3.3 18.3 1.0 N A:CYS40 3.6 16.9 1.0 CA A:CYS40 4.0 17.6 1.0 CG A:HIS53 4.2 13.4 1.0 ND1 A:HIS53 4.2 13.4 1.0 CG A:HIS58 4.2 18.6 1.0 ND1 A:HIS58 4.3 21.5 1.0 CB A:VAL39 4.5 21.7 1.0 CA A:CYS37 4.6 14.1 1.0 C A:CYS40 4.6 17.7 1.0 CB A:LYS42 4.7 15.8 1.0 C A:VAL39 4.7 20.1 1.0 N A:HIS41 4.7 15.6 1.0 CG1 A:VAL57 4.8 21.4 1.0 N A:LYS42 4.9 15.6 1.0 N A:VAL39 5.0 17.3 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of OSSUF4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of OSSUF4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn102 b:14.8 occ:1.00 NE2 A:HIS29 2.1 13.4 1.0 NE2 A:HIS34 2.1 13.7 1.0 SG A:CYS13 2.2 13.9 1.0 SG A:CYS16 2.3 16.0 1.0 CD2 A:HIS34 3.0 13.4 1.0 CD2 A:HIS29 3.0 13.6 1.0 CE1 A:HIS29 3.0 14.6 1.0 CE1 A:HIS34 3.2 13.7 1.0 CB A:CYS13 3.2 14.3 1.0 CB A:CYS16 3.3 15.9 1.0 N A:CYS16 3.8 15.4 1.0 CA A:CYS16 4.1 16.1 1.0 ND1 A:HIS29 4.2 13.8 1.0 CG A:HIS34 4.2 12.6 1.0 CG A:HIS29 4.2 13.4 1.0 ND1 A:HIS34 4.2 12.2 1.0 CB A:TYR15 4.3 14.5 1.0 C A:TYR15 4.6 15.0 1.0 CA A:CYS13 4.6 13.0 1.0 CA A:TYR15 4.8 14.5 1.0 N A:TYR15 4.8 14.5 1.0 C A:CYS16 4.9 17.1 1.0 C A:CYS13 4.9 12.7 1.0 O A:CYS13 5.0 14.0 1.0

B.Liu, Y.Liu, B.Wang, Q.Luo, J.Shi, J.Gan, W.H.Shen, Y.Yu, A.Dong. The Transcription Factor OSSUF4 Interacts with SDG725 in Promoting H3K36ME3 Establishment. Nat Commun V. 10 2999 2019.
ISSN: ESSN 2041-1723
PubMed: 31278262
DOI: 10.1038/S41467-019-10850-5