Zinc in PDB 6ih0: Aquifex Aeolicus Lpxc Complex with Achn-975

Enzymatic activity of Aquifex Aeolicus Lpxc Complex with Achn-975

All present enzymatic activity of Aquifex Aeolicus Lpxc Complex with Achn-975:
3.5.1.108;

Protein crystallography data

The structure of Aquifex Aeolicus Lpxc Complex with Achn-975, PDB code: 6ih0 was solved by D.Y.Li, S.Fan, Y.Y.Jin, C.Zhang, G.X.Lv, G.T.Wu, Z.Y.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.21
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 65.569, 65.569, 131.595, 90.00, 90.00, 120.00
R / Rfree (%) 16.4 / 18.2

Zinc Binding Sites:

The binding sites of Zinc atom in the Aquifex Aeolicus Lpxc Complex with Achn-975 (pdb code 6ih0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Aquifex Aeolicus Lpxc Complex with Achn-975, PDB code: 6ih0:

Zinc binding site 1 out of 1 in 6ih0

Go back to Zinc Binding Sites List in 6ih0
Zinc binding site 1 out of 1 in the Aquifex Aeolicus Lpxc Complex with Achn-975


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Aquifex Aeolicus Lpxc Complex with Achn-975 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn302

b:11.7
occ:1.00
OD1 A:ASP230 2.0 11.8 1.0
O2 A:A5F301 2.1 13.0 1.0
NE2 A:HIS74 2.1 12.2 1.0
NE2 A:HIS226 2.1 11.0 1.0
O04 A:A5F301 2.1 13.3 1.0
CG A:ASP230 2.8 11.8 1.0
C18 A:A5F301 2.8 13.2 1.0
OD2 A:ASP230 2.8 12.7 1.0
N7 A:A5F301 3.0 14.1 1.0
CD2 A:HIS74 3.0 11.7 1.0
CE1 A:HIS226 3.1 10.9 1.0
CD2 A:HIS226 3.1 11.3 1.0
CE1 A:HIS74 3.1 16.3 1.0
O A:HOH639 4.1 18.0 1.0
ND1 A:HIS226 4.2 11.4 1.0
OG1 A:THR179 4.2 14.7 1.0
ND1 A:HIS74 4.2 16.5 1.0
CG A:HIS226 4.2 11.5 1.0
CG A:HIS74 4.2 12.3 1.0
CB A:ASP230 4.2 11.4 1.0
OE2 A:GLU73 4.3 13.6 1.0
CG A:GLU73 4.3 12.7 1.0
C14 A:A5F301 4.3 13.3 1.0
CB A:THR179 4.4 13.6 1.0
C16 A:A5F301 4.6 15.2 1.0
O A:HOH499 4.8 19.6 1.0
CD A:GLU73 4.8 12.7 1.0
CE1 A:HIS253 4.8 13.1 1.0
NE2 A:HIS253 4.9 14.1 1.0
C13 A:A5F301 4.9 12.9 1.0
CA A:ASP230 4.9 11.5 1.0
O A:HIS226 4.9 11.3 1.0
N5 A:A5F301 4.9 14.9 1.0
C17 A:A5F301 4.9 14.7 1.0
CA A:THR179 5.0 12.2 1.0

Reference:

D.Y.Li, S.Fan, Y.Y.Jin, C.Zhang, G.X.Lv, G.T.Wu, Z.Y.Yang. Aquifex Aeolicus Lpxc Complex with Achn-975 To Be Published.
Page generated: Wed Dec 16 12:00:37 2020

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