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Zinc in PDB 6h5u: Mamm Ctd H264E - Zinc Form 2

Protein crystallography data

The structure of Mamm Ctd H264E - Zinc Form 2, PDB code: 6h5u was solved by S.Barber-Zucker, R.Zarivach, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.03 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 88.049, 55.648, 63.767, 90.00, 92.14, 90.00
R / Rfree (%) 17 / 22.1

Zinc Binding Sites:

The binding sites of Zinc atom in the Mamm Ctd H264E - Zinc Form 2 (pdb code 6h5u). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Mamm Ctd H264E - Zinc Form 2, PDB code: 6h5u:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in 6h5u

Go back to Zinc Binding Sites List in 6h5u
Zinc binding site 1 out of 3 in the Mamm Ctd H264E - Zinc Form 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Mamm Ctd H264E - Zinc Form 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:14.9
occ:1.00
OE2 A:GLU289 2.0 24.1 1.0
NE2 A:HIS236 2.0 13.8 1.0
CD A:GLU289 2.7 26.3 1.0
OE1 A:GLU289 2.9 31.8 1.0
CD2 A:HIS236 2.9 14.6 1.0
CE1 A:HIS236 3.0 17.4 1.0
CG A:HIS236 4.0 16.1 1.0
ND1 A:HIS236 4.1 16.5 1.0
CG A:GLU289 4.1 20.6 1.0
CG2 A:ILE235 4.5 14.9 1.0
O A:HOH551 4.7 40.2 1.0
CD1 A:ILE251 4.8 19.9 1.0

Zinc binding site 2 out of 3 in 6h5u

Go back to Zinc Binding Sites List in 6h5u
Zinc binding site 2 out of 3 in the Mamm Ctd H264E - Zinc Form 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Mamm Ctd H264E - Zinc Form 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn401

b:17.3
occ:1.00
NE2 C:HIS236 2.0 14.7 1.0
OE1 C:GLU289 2.1 21.5 1.0
CD C:GLU289 2.8 26.4 1.0
OE2 C:GLU289 2.8 35.5 1.0
CE1 C:HIS236 3.0 16.9 1.0
CD2 C:HIS236 3.0 13.7 1.0
O C:HOH503 3.8 42.3 1.0
ND1 C:HIS236 4.1 15.8 1.0
CG2 C:ILE235 4.1 22.9 1.0
CG C:HIS236 4.1 15.2 1.0
CG C:GLU289 4.3 25.0 1.0
CB C:GLU289 4.9 19.9 1.0
CD1 C:ILE251 5.0 17.6 1.0

Zinc binding site 3 out of 3 in 6h5u

Go back to Zinc Binding Sites List in 6h5u
Zinc binding site 3 out of 3 in the Mamm Ctd H264E - Zinc Form 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Mamm Ctd H264E - Zinc Form 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn402

b:17.1
occ:1.00
NE2 C:HIS285 1.9 18.5 1.0
CD2 C:HIS285 2.9 22.6 1.0
CE1 C:HIS285 2.9 18.0 1.0
ND1 C:HIS285 4.0 17.7 1.0
CG C:HIS285 4.1 19.4 1.0

Reference:

S.Barber-Zucker, R.Zarivach. Mamm Ctd H264E - Zinc Form 2 To Be Published.
Page generated: Wed Dec 16 11:55:37 2020

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