Zinc in PDB 6f79: Carboxypeptidase T Mutant L211Q with Sulphamoil Arginine

Enzymatic activity of Carboxypeptidase T Mutant L211Q with Sulphamoil Arginine

All present enzymatic activity of Carboxypeptidase T Mutant L211Q with Sulphamoil Arginine:
3.4.17.18;

Protein crystallography data

The structure of Carboxypeptidase T Mutant L211Q with Sulphamoil Arginine, PDB code: 6f79 was solved by V.I.Timofeev, V.K.Akparov, I.P.Kuranova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.85 / 1.90
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 157.960, 157.960, 104.850, 90.00, 90.00, 120.00
R / Rfree (%) 12.7 / 14.7

Other elements in 6f79:

The structure of Carboxypeptidase T Mutant L211Q with Sulphamoil Arginine also contains other interesting chemical elements:

Calcium (Ca) 5 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Carboxypeptidase T Mutant L211Q with Sulphamoil Arginine (pdb code 6f79). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Carboxypeptidase T Mutant L211Q with Sulphamoil Arginine, PDB code: 6f79:

Zinc binding site 1 out of 1 in 6f79

Go back to Zinc Binding Sites List in 6f79
Zinc binding site 1 out of 1 in the Carboxypeptidase T Mutant L211Q with Sulphamoil Arginine


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Carboxypeptidase T Mutant L211Q with Sulphamoil Arginine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:9.0
occ:1.00
N19 A:0X9407 2.0 11.4 1.0
ND1 A:HIS69 2.1 7.9 1.0
ND1 A:HIS204 2.1 8.2 1.0
OE1 A:GLU72 2.2 7.9 1.0
OE2 A:GLU72 2.3 8.8 1.0
CD A:GLU72 2.6 8.2 1.0
CE1 A:HIS69 3.0 7.8 1.0
CE1 A:HIS204 3.1 8.7 1.0
CG A:HIS204 3.1 8.3 1.0
CG A:HIS69 3.1 7.8 1.0
S18 A:0X9407 3.2 12.7 1.0
O21 A:0X9407 3.3 12.8 1.0
CB A:HIS204 3.4 8.2 1.0
CB A:HIS69 3.5 7.9 1.0
O A:THR205 3.9 8.4 1.0
O A:HOH694 4.0 13.8 1.0
CG A:GLU72 4.1 7.9 1.0
NE2 A:HIS69 4.1 7.7 1.0
NE2 A:HIS204 4.2 8.5 1.0
N17 A:0X9407 4.2 11.5 1.0
CD2 A:HIS69 4.2 7.8 1.0
CD2 A:HIS204 4.2 8.5 1.0
O20 A:0X9407 4.3 12.3 1.0
CA A:HIS204 4.3 8.0 1.0
C13 A:0X9407 4.3 11.2 1.0
O A:HOH517 4.3 19.5 1.0
N A:THR205 4.5 8.4 1.0
NH1 A:ARG129 4.5 9.8 1.0
O15 A:0X9407 4.7 10.2 1.0
OE1 A:GLU277 4.7 15.4 1.0
C14 A:0X9407 4.8 10.8 1.0
CA A:HIS69 4.8 8.0 1.0
N A:HIS69 4.9 8.1 1.0
CB A:GLU72 4.9 8.2 1.0
C A:HIS204 4.9 7.9 1.0
C A:THR205 5.0 8.4 1.0

Reference:

V.I.Timofeev, V.K.Akparov, I.P.Kuranova. Carboxypeptidase T Mutant L211Q with Sulphamoil Arginine To Be Published.
Page generated: Wed Dec 16 11:46:38 2020

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