Atomistry » Zinc » PDB 6cvs-6d5p » 6d1l
Atomistry »
  Zinc »
    PDB 6cvs-6d5p »
      6d1l »

Zinc in PDB 6d1l: Design, Synthesis, and X-Ray of Selenides Bearing Benzenesulfonamide Moiety with Neuropathic Pain Modulating Effects

Enzymatic activity of Design, Synthesis, and X-Ray of Selenides Bearing Benzenesulfonamide Moiety with Neuropathic Pain Modulating Effects

All present enzymatic activity of Design, Synthesis, and X-Ray of Selenides Bearing Benzenesulfonamide Moiety with Neuropathic Pain Modulating Effects:
4.2.1.1;

Protein crystallography data

The structure of Design, Synthesis, and X-Ray of Selenides Bearing Benzenesulfonamide Moiety with Neuropathic Pain Modulating Effects, PDB code: 6d1l was solved by T.S.Peat, A.Angeli, L.Di Cesare Mannelli, L.Micheli, C.Ghelardini, C.T.Supuran, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 69.80 / 1.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.327, 41.341, 72.080, 90.00, 104.43, 90.00
R / Rfree (%) 16.1 / 18.1

Zinc Binding Sites:

The binding sites of Zinc atom in the Design, Synthesis, and X-Ray of Selenides Bearing Benzenesulfonamide Moiety with Neuropathic Pain Modulating Effects (pdb code 6d1l). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Design, Synthesis, and X-Ray of Selenides Bearing Benzenesulfonamide Moiety with Neuropathic Pain Modulating Effects, PDB code: 6d1l:

Zinc binding site 1 out of 1 in 6d1l

Go back to Zinc Binding Sites List in 6d1l
Zinc binding site 1 out of 1 in the Design, Synthesis, and X-Ray of Selenides Bearing Benzenesulfonamide Moiety with Neuropathic Pain Modulating Effects


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Design, Synthesis, and X-Ray of Selenides Bearing Benzenesulfonamide Moiety with Neuropathic Pain Modulating Effects within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:3.3
occ:1.00
N12 A:FQV303 1.9 4.5 1.0
NE2 A:HIS94 2.0 3.2 1.0
NE2 A:HIS96 2.0 3.9 1.0
ND1 A:HIS119 2.0 3.5 1.0
CE1 A:HIS119 2.9 3.3 1.0
CD2 A:HIS94 3.0 3.4 1.0
CD2 A:HIS96 3.0 3.8 1.0
O13 A:FQV303 3.0 4.4 1.0
CE1 A:HIS94 3.0 3.3 1.0
S10 A:FQV303 3.0 4.6 1.0
CE1 A:HIS96 3.1 3.9 1.0
CG A:HIS119 3.1 3.4 1.0
CB A:HIS119 3.6 3.5 1.0
OG1 A:THR199 3.9 3.8 1.0
OE1 A:GLU106 4.0 4.2 1.0
C9 A:FQV303 4.1 5.5 1.0
NE2 A:HIS119 4.1 3.4 1.0
ND1 A:HIS94 4.1 3.4 1.0
CG A:HIS94 4.1 3.4 1.0
O11 A:FQV303 4.1 4.5 1.0
CG A:HIS96 4.2 3.8 1.0
ND1 A:HIS96 4.2 4.0 1.0
CD2 A:HIS119 4.2 3.4 1.0
C1 A:GOL302 4.5 8.8 1.0
C14 A:FQV303 4.7 6.1 1.0
C8 A:FQV303 4.9 6.2 1.0
CD A:GLU106 4.9 4.5 1.0

Reference:

A.Angeli, L.Di Cesare Mannelli, E.Lucarini, T.S.Peat, C.Ghelardini, C.T.Supuran. Design, Synthesis and X-Ray Crystallography of Selenides Bearing Benzenesulfonamide Moiety with Neuropathic Pain Modulating Effects. Eur J Med Chem V. 154 210 2018.
ISSN: ISSN 1768-3254
PubMed: 29803994
DOI: 10.1016/J.EJMECH.2018.05.026
Page generated: Mon Oct 28 19:21:10 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy