Zinc in PDB 6cqg: Yycf Effector Domain Structure Without Dna Bound

The structure of Yycf Effector Domain Structure Without Dna Bound, PDB code: 6cqg was solved by A.Riboldi-Tunnicliffe, M.Gabrielsen, R.M.Williamson, S.Panjikar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.64 / 1.93
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	32.630, 46.490, 63.270, 90.00, 90.00, 90.00
R / Rfree (%)	18.4 / 23.6

The binding sites of Zinc atom in the Yycf Effector Domain Structure Without Dna Bound (pdb code 6cqg). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Yycf Effector Domain Structure Without Dna Bound, PDB code: 6cqg:

Zinc binding site 1 out of 1 in the Yycf Effector Domain Structure Without Dna Bound


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Yycf Effector Domain Structure Without Dna Bound within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn301 b:36.9 occ:1.00 NE2 A:HIS167 2.1 34.7 1.0 NE2 A:HIS171 2.3 46.9 1.0 NE2 A:HIS180 2.5 48.7 1.0 CE1 A:HIS180 2.7 49.7 1.0 CD2 A:HIS167 3.0 31.1 1.0 CE1 A:HIS171 3.1 52.0 1.0 CE1 A:HIS167 3.2 36.1 1.0 CD2 A:HIS171 3.3 44.2 1.0 CD2 A:HIS180 3.7 47.6 1.0 ND1 A:HIS180 3.9 47.6 1.0 CG A:HIS167 4.1 26.5 1.0 ND1 A:HIS167 4.2 31.5 1.0 ND1 A:HIS171 4.2 46.1 1.0 CG2 A:THR184 4.3 36.4 1.0 CG A:HIS180 4.3 43.1 1.0 CG A:HIS171 4.4 43.6 1.0 OG1 A:THR184 4.6 33.7 1.0 CB A:THR184 4.9 34.9 1.0 CG2 A:ILE176 5.0 35.8 1.0

M.Gabrielsen, R.M.Williamson, S.Panjikar, A.Riboldi-Tunnicliffe. Yycf Effector Domain Structure Without Dna Bound To Be Published.