Zinc in PDB 6b05: The Crystal Structure of the Ferredoxin Protease Fusc E83A Mutant in Complex with Arabidopsis Ferredoxin

Protein crystallography data

The structure of The Crystal Structure of the Ferredoxin Protease Fusc E83A Mutant in Complex with Arabidopsis Ferredoxin, PDB code: 6b05 was solved by R.Grinter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.99 / 1.90
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 81.338, 126.505, 133.545, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 23.9

Zinc Binding Sites:

The binding sites of Zinc atom in the The Crystal Structure of the Ferredoxin Protease Fusc E83A Mutant in Complex with Arabidopsis Ferredoxin (pdb code 6b05). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of the Ferredoxin Protease Fusc E83A Mutant in Complex with Arabidopsis Ferredoxin, PDB code: 6b05:

Zinc binding site 1 out of 1 in 6b05

Go back to Zinc Binding Sites List in 6b05
Zinc binding site 1 out of 1 in the The Crystal Structure of the Ferredoxin Protease Fusc E83A Mutant in Complex with Arabidopsis Ferredoxin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of the Ferredoxin Protease Fusc E83A Mutant in Complex with Arabidopsis Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1001

b:37.1
occ:1.00
NE2 A:HIS84 2.1 33.7 1.0
OE1 A:GLU165 2.1 42.5 1.0
NE2 A:HIS80 2.2 27.8 1.0
CD A:GLU165 2.9 43.2 1.0
OE2 A:GLU165 2.9 48.7 1.0
CD2 A:HIS84 3.0 28.8 1.0
CE1 A:HIS84 3.1 34.2 1.0
CD2 A:HIS80 3.1 26.8 1.0
CE1 A:HIS80 3.2 20.7 1.0
CG A:HIS84 4.1 30.5 1.0
ND1 A:HIS84 4.2 33.5 1.0
CG A:HIS80 4.3 28.4 1.0
ND1 A:HIS80 4.3 29.2 1.0
CG A:GLU165 4.3 42.1 1.0
O A:HOH1431 4.5 30.1 1.0
CB A:GLU165 4.8 33.5 1.0

Reference:

R.Grinter, I.D.Hay, J.Song, J.Wang, D.Teng, V.Dhanesakaran, J.J.Wilksch, M.R.Davies, D.Littler, S.A.Beckham, I.R.Henderson, R.A.Strugnell, G.Dougan, T.Lithgow. Fusc, A Member of the M16 Protease Family Acquired By Bacteria For Iron Piracy Against Plants. Plos Biol. V. 16 06026 2018.
ISSN: ESSN 1545-7885
PubMed: 30071011
DOI: 10.1371/JOURNAL.PBIO.2006026
Page generated: Wed Dec 16 11:31:05 2020

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