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Zinc in PDB 5xr2: SAV0551

Enzymatic activity of SAV0551

All present enzymatic activity of SAV0551:
3.5.1.124;

Protein crystallography data

The structure of SAV0551, PDB code: 5xr2 was solved by H.J.Kim, A.R.Kwon, B.J.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.65 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 96.284, 129.454, 187.853, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 25.4

Zinc Binding Sites:

The binding sites of Zinc atom in the SAV0551 (pdb code 5xr2). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the SAV0551, PDB code: 5xr2:

Zinc binding site 1 out of 1 in 5xr2

Go back to Zinc Binding Sites List in 5xr2
Zinc binding site 1 out of 1 in the SAV0551


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of SAV0551 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn401

b:52.0
occ:1.00
NE2 C:HIS295 2.5 46.4 1.0
NE2 C:HIS299 2.7 46.0 1.0
CD2 C:HIS295 3.2 43.7 1.0
CD2 C:HIS299 3.3 45.6 1.0
CE1 C:HIS295 3.6 43.9 1.0
CE1 C:HIS299 3.9 49.9 1.0
CG C:HIS295 4.5 43.9 1.0
CG C:HIS299 4.6 52.4 1.0
ND1 C:HIS295 4.6 46.9 1.0
ND1 C:HIS299 4.9 52.6 1.0
OD1 C:ASN291 4.9 38.9 1.0

Reference:

H.J.Kim, K.Y.Lee, A.R.Kwon, B.J.Lee. Structural and Functional Studies of SAV0551 Fromstaphylococcus Aureusas A Chaperone and Glyoxalase III. Biosci. Rep. V. 37 2017.
ISSN: ISSN 1573-4935
PubMed: 29046369
DOI: 10.1042/BSR20171106
Page generated: Wed Dec 16 11:21:09 2020

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