Zinc in PDB 5vf0: Solution uc(Nmr) Structure of Human RAD18 (198-240) in Complex with Ubiquitin

All present enzymatic activity of Solution uc(Nmr) Structure of Human RAD18 (198-240) in Complex with Ubiquitin:
2.3.2.27;

The binding sites of Zinc atom in the Solution uc(Nmr) Structure of Human RAD18 (198-240) in Complex with Ubiquitin (pdb code 5vf0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution uc(Nmr) Structure of Human RAD18 (198-240) in Complex with Ubiquitin, PDB code: 5vf0:

Zinc binding site 1 out of 1 in the Solution uc(Nmr) Structure of Human RAD18 (198-240) in Complex with Ubiquitin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution uc(Nmr) Structure of Human RAD18 (198-240) in Complex with Ubiquitin within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn300 b:0.0 occ:1.00 NE2 B:HIS219 2.0 0.0 1.0 SG B:CYS207 2.3 0.0 1.0 SG B:CYS204 2.3 0.0 1.0 SG B:CYS223 2.3 0.0 1.0 HB B:VAL206 2.9 0.0 1.0 CE1 B:HIS219 3.0 0.0 1.0 CD2 B:HIS219 3.0 0.0 1.0 HB3 B:CYS207 3.0 0.0 1.0 H B:CYS207 3.1 0.0 1.0 HB2 B:CYS223 3.1 0.0 1.0 CB B:CYS204 3.2 0.0 1.0 HB3 B:CYS204 3.2 0.0 1.0 HE1 B:HIS219 3.2 0.0 1.0 CB B:CYS207 3.3 0.0 1.0 HD2 B:HIS219 3.3 0.0 1.0 CB B:CYS223 3.3 0.0 1.0 HB2 B:CYS204 3.3 0.0 1.0 HH21 B:ARG226 3.7 0.0 1.0 N B:CYS207 3.7 0.0 1.0 HB3 B:CYS223 3.8 0.0 1.0 CB B:VAL206 4.0 0.0 1.0 HH22 B:ARG226 4.0 0.0 1.0 CA B:CYS207 4.0 0.0 1.0 HB B:VAL209 4.1 0.0 1.0 H B:GLY208 4.1 0.0 1.0 HB2 B:CYS207 4.1 0.0 1.0 ND1 B:HIS219 4.1 0.0 1.0 CG B:HIS219 4.2 0.0 1.0 NH2 B:ARG226 4.2 0.0 1.0 H B:VAL206 4.3 0.0 1.0 HG11 B:VAL206 4.3 0.0 1.0 HG21 B:VAL206 4.4 0.0 1.0 HA B:CYS223 4.5 0.0 1.0 CA B:CYS223 4.6 0.0 1.0 HG23 B:VAL209 4.6 0.0 1.0 C B:VAL206 4.6 0.0 1.0 HG23 B:VAL206 4.6 0.0 1.0 N B:GLY208 4.6 0.0 1.0 CG2 B:VAL206 4.6 0.0 1.0 CG1 B:VAL206 4.6 0.0 1.0 CA B:CYS204 4.6 0.0 1.0 C B:CYS207 4.7 0.0 1.0 HD11 B:ILE211 4.7 0.0 1.0 HG21 B:VAL209 4.7 0.0 1.0 HD22 B:LEU220 4.7 0.0 1.0 HG12 B:VAL206 4.7 0.0 1.0 CA B:VAL206 4.8 0.0 1.0 HD12 B:ILE211 4.8 0.0 1.0 H B:VAL209 4.8 0.0 1.0 N B:VAL206 4.9 0.0 1.0 HA B:CYS204 4.9 0.0 1.0 HA B:CYS207 5.0 0.0 1.0 CG2 B:VAL209 5.0 0.0 1.0

Q.Hu, M.V.Botuyan, G.Cui, D.Zhao, G.Mer. Mechanisms of Ubiquitin-Nucleosome Recognition and Regulation of 53BP1 Chromatin Recruitment By RNF168/169 and RAD18. Mol. Cell V. 66 473 2017.
ISSN: ISSN 1097-4164
PubMed: 28506460
DOI: 10.1016/J.MOLCEL.2017.04.009